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Agronomy Ontology

Abbreviation: AgrO

General Information

AgrO, the Agronomy Ontology, describes agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments. AgrO is being built by CGIAR using traits identified by agronomists, the ICASA variables, and other existing ontologies such as ENVO, UO, and PATO. It will complement existing crop, livestock, and fish ontologies to enable harmonized approaches to data collection, facilitating easier data sharing and reuse. A key use case for AgrO is the Agronomy Field Information Management System (AgroFIMS). AgroFIMS enables digital collection of agronomic data that is semantically described a priori with agronomic terms from AgrO.

Homepage https://bigdata.cgiar.org/resources/agronomy-ontology/

Countries that developed this resource France

Created in 2016

Taxonomic range

All

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: AgrO; Agronomy Ontology; DOI: https://doi.org/10.25504/FAIRsharing.m40bhw; Last edited: Feb. 24, 2020, 1:06 p.m.; Last accessed: Apr 10 2020 11:28 a.m.

This record is maintained by CelineAubert ORCID

Record added: Oct. 24, 2017, 9:41 a.m.
Record updated: Feb. 24, 2020, 1:06 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.m40bhw' by 'The FAIRsharing Team' at 13:06, 24 Feb 2020 (approved):

	'dataProcesses' has been modified:
		Before:
			AgroPortal: Browse / Download
		After:
			AgroPortal: Browse / Download
			Download (OWL)
		Added:
			Download (OWL)
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.m40bhw' by 'CelineAubert' at 10:56, 05 Feb 2020 (approved):

	'user_defined_tags' has been modified:
		Before:
			Livestock
		After:
		Added:
		Removed:
			Livestock

	'onto_disciplines' has been modified:
		Before:
			Agriculture
			Agronomy
			Animal Breeding
			Animal Husbandry
			Plant Breeding
		After:
			Agriculture
			Agronomy
			Farming Systems Research
			Plant Breeding
		Added:
			Farming Systems Research
		Removed:
			Animal Breeding
			Animal Husbandry

	'homepage' has been modified:
		Before: https://github.com/AgriculturalSemantics/agro
		After: https://bigdata.cgiar.org/resources/agronomy-ontology/

	'onto_domains' has been modified:
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		After:
			Cropping systems
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			Cropping systems
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	'countries' has been modified:
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			France
			Italy
		After:
			France
		Added:
		Removed:
			Italy

Edits to 'https://fairsharing.org/FAIRsharing.m40bhw' by 'The FAIRsharing Team' at 20:19, 08 Jan 2020 (approved):

	'supportLinks' has been modified:
		Before:
			forum|https://github.com/AgriculturalSemantics/agro/issues/
			mailing list|https://groups.google.com/group/agronomyOntology
			online documentation|http://agroportal.lirmm.fr/ontologies/AGRO
		After:
			forum|https://github.com/AgriculturalSemantics/agro/issues/
			mailing list|https://groups.google.com/group/agronomyOntology
		Added:
		Removed:
			online documentation|http://agroportal.lirmm.fr/ontologies/AGRO

	'dataProcesses' has been modified:
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		After:
			AgroPortal: Browse / Download
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			AgroPortal: Browse / Download
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Edits to 'https://fairsharing.org/FAIRsharing.m40bhw' by 'The FAIRsharing Team' at 11:51, 08 Jan 2020 (approved):

	'description' has been modified:
		Before: AgrO, the Agronomy Ontology, describes agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments. AgrO is being built by CGIAR using traits identified by agronomists, the ICASA variables, and other existing ontologies such as ENVO, UO, and PATO. It will complement existing crop, livestock, and fish ontologies to enable harmonized approaches to data collection, facilitating easier data sharing and reuse. AgrO is intended to be part of an Agronomy Management System and fieldbook modelled on a CGIAR Breeding Management System to capture agronomic data.
		After: AgrO, the Agronomy Ontology, describes agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments. AgrO is being built by CGIAR using traits identified by agronomists, the ICASA variables, and other existing ontologies such as ENVO, UO, and PATO. It will complement existing crop, livestock, and fish ontologies to enable harmonized approaches to data collection, facilitating easier data sharing and reuse. A key use case for AgrO is the Agronomy Field Information Management System (AgroFIMS). AgroFIMS enables digital collection of agronomic data that is semantically described a priori with agronomic terms from AgrO.

Edits to 'https://fairsharing.org/FAIRsharing.m40bhw' by 'The FAIRsharing Team' at 11:50, 08 Jan 2020 (approved):

	'status' has been modified:
		Before: RDY
		After: DEV

	'organizations' has been modified:
		Before:
		After:
			Bioversity International, Rome, Italy|https://www.bioversityinternational.org/|Maintains
			CGIAR, Montpellier, France|http://www.cgiar.org/|Maintains
		Added:
			Bioversity International, Rome, Italy|https://www.bioversityinternational.org/|Maintains
			CGIAR, Montpellier, France|http://www.cgiar.org/|Maintains
		Removed:

	'supportLinks' has been modified:
		Before:
		After:
			forum|https://github.com/AgriculturalSemantics/agro/issues/
			mailing list|https://groups.google.com/group/agronomyOntology
			online documentation|http://agroportal.lirmm.fr/ontologies/AGRO
		Added:
			forum|https://github.com/AgriculturalSemantics/agro/issues/
			mailing list|https://groups.google.com/group/agronomyOntology
			online documentation|http://agroportal.lirmm.fr/ontologies/AGRO
		Removed:

	'name' has been modified:
		Before: AGRonomy Ontology
		After: Agronomy Ontology

	'countries' has been modified:
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			France
			Italy
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			France
			Italy
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	'licences' has been modified:
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			Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
		Added:
			Creative Commons Attribution 4.0 International (CC BY 4.0)|https://creativecommons.org/licenses/by/4.0/|Data
		Removed:

	'onto_disciplines' has been modified:
		Before:
		After:
			Agriculture
			Agronomy
			Animal Breeding
			Animal Husbandry
			Plant Breeding
		Added:
			Agriculture
			Agronomy
			Animal Breeding
			Animal Husbandry
			Plant Breeding
		Removed:

	'user_defined_tags' has been modified:
		Before:
		After:
			Livestock
		Added:
			Livestock
		Removed:

	'related_standards' has been modified:
		Before:
		After:
			Environment Ontology
			Units Ontology
			Phenotypic QualiTy Ontology
			OBO Relations Ontology
			Chemical Entities of Biological Interest
			Information Artifact Ontology
		Added:
			Environment Ontology
			Units Ontology
			Phenotypic QualiTy Ontology
			OBO Relations Ontology
			Chemical Entities of Biological Interest
			Information Artifact Ontology
		Removed:

	'miriam_id' has been modified:
		Before: None
		After: 

	'shortname' has been modified:
		Before: AGRO
		After: AgrO

	'description' has been modified:
		Before: AGRO, the AGRonomy Ontology, describes agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments. AGRO is being built using traits identified by agronomists, the ICASA variables, and other existing ontologies such as ENVO, UO, and PATO, IAO, and CHEBI. Further, AGRO will power an Agronomy Management System and fieldbook modeled on a CGIAR Breeding Management System to capture agronomic data.
		After: AgrO, the Agronomy Ontology, describes agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments. AgrO is being built by CGIAR using traits identified by agronomists, the ICASA variables, and other existing ontologies such as ENVO, UO, and PATO. It will complement existing crop, livestock, and fish ontologies to enable harmonized approaches to data collection, facilitating easier data sharing and reuse. AgrO is intended to be part of an Agronomy Management System and fieldbook modelled on a CGIAR Breeding Management System to capture agronomic data.

Support

General

forum	GitHub Issue Tracker
Mailing List	Google Group

Additional Information

Contact

Marie-Angélique Laporte

External Links

Bioportal	http://bioportal.bioontology.org/ontologies/AGRO
OBO	http://obofoundry.org/ontology/agro.html

Tools

AgroFIMS - the Agronomy Field Information Management System

https://apps.cipotato.org/hidapagrofims

Schemas

No XSD schemas defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Creative Commons Attribution 4.0 International (CC BY 4.0)

Data Release

Download (OWL)

http://purl.obolibrary.org/obo/agro.owl

Data Access

AgroPortal: Browse / Download

http://agroportal.lirmm.fr/ontologies/AGRO

REST Web Services

GitHub

https://github.com/AgriculturalSemantics/agro

Publications

No publications available

AGRO Ontology Display

View in BioPortal.

Disclaimer: This widget assumes the availability of the ontology resources in the NCBO BioPortal.

View in OBO Foundry.

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Implementing Databases (0)

No Related Databases

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by CelineAubert ORCID

Maintains

Bioversity International, Rome, Italy (Consortium)
CGIAR, Montpellier, France (Government body)

Agronomy Ontology

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