Distributed Sequence Annotation System
How to cite this record FAIRsharing.org: DAS; Distributed Sequence Annotation System; DOI: https://doi.org/10.25504/FAIRsharing.mcgj5b; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: Sep 20 2021 2:13 a.m.
Record updated: Oct. 24, 2016, 7:05 p.m. by The FAIRsharing Team.
Edits to 'https://fairsharing.org/FAIRsharing.mcgj5b' by 'The FAIRsharing Team' at 19:05, 24 Oct 2016 (approved): 'description' has been modified: Before: "Distributed Sequence Annotation System" is a standard, specialising in the fields described under "scope and data types", below. Until this entry is claimed, more information on this project can be found at http://www.biodas.org/documents/spec-1.6.html. This text was generated automatically. If you work on the project responsible for "Distributed Sequence Annotation System" then please consider helping us by claiming this record and updating it appropriately. After: The Distributed Annotation System (DAS) defines a communication protocol used to exchange annotations on genomic or protein sequences.
No XSD schemas defined
Conditions of Use
The distributed annotation system.
Dowell RD,Jokerst RM,Day A,Eddy SR,Stein L
BMC Bioinformatics 2001
No guidelines defined
No semantic standards defined
Models and Formats
No syntax standards defined
No identifier schema standards defined
No metrics standards defined
Gene3D uses the information in CATH to predict the locations of structural domains on millions of protein sequences available in public databases. Sequence data from UniProtKB and Ensembl for domains with no experimentally determined structures are scanned against CATH HMMs to predict domain sequence boundaries and make homologous superfamily assignments.
SNPedia is a wiki resource of the functional consequences of human genetic variation as published in peer-reviewed studies. Entries are formatted to allow associations to be assigned to single genotypes as well as sets of genotypes (genosets). Curation occurs through editorial, community/user, and semi-automated processes.
The MOuse NOnCode Lung database
MONOCLdb is an integrative and interactive database designed to retrieve and visualize annotations and expression profiles of long-non coding RNAs (lncRNAs) expressed in Collaborative Cross (http://compgen.unc.edu/) founder mice in response to respiratory influenza and SARS infections.
A crowdsourced collection of personal genomics data. Includes SNP genotyping, exome sequencing data, phenotypic annotation and quantified self tracking data.
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Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA (Research institute)