databases > DOI:10.25504/FAIRsharing.swbypy

ready AmoebaDB

General Information
AmoebaDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for Entamoeba and Acanthamoeba parasites. In its first released, AmoebaDB contained the genomes of three Entamoeba species. AmoebaDB integrates whole genome sequence and annotation and will rapidly expand to include experimental data and environmental isolate sequences provided by community researchers . The database includes supplemental bioinformatics analyses and a web interface for data-mining.

Homepage http://amoebadb.org

Countries that developed this resource United States

Created in 2010





How to cite this record FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 26 2020 2:22 a.m.


Record updated: Dec. 12, 2016, 9:47 p.m. by The FAIRsharing Team.

Show edit history




Access / Retrieve Data

Conditions of Use

Applies to: Data use
  • Attribution required
  • Publicly available data

Data Curation

http://amoebadb.org/EuPathDB_datasubm_SOP.pdf No link recorded

Data Access

Download http://amoebadb.org/common/downloads/



Publications

EuPathDB: a portal to eukaryotic pathogen databases.

Aurrecoechea C., Brestelli J., Brunk BP., Fischer S., Gajria B., Gao X., Gingle A., Grant G., Harb OS., Heiges M., Innamorato F., Iodice J., Kissinger JC., Kraemer ET., Li W., Miller JA., Nayak V., Pennington C., Pinney DF., Roos DS., Ross C., Srinivasamoorthy G., Stoeckert CJ., Thibodeau R., Treatman C., Wang H.,
Nucleic Acids Res. 2010

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

Maintains

Grant Number(s)

  • HHSN272200900038C (National Institutes of Health (NIH), Bethesda, MD, USA)