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FlowRepository

Recommended

General Information

FlowRepository is a database of flow cytometry experiments where you can query and download data collected and annotated according to the MIFlowCyt standard. Data are generally associated with peer reviewed manuscripts.

Homepage http://www.flowrepository.org

Countries that developed this resource Canada

Created in 2012

Taxonomic range

All

Knowledge Domains

Subjects

In the following recommendations:

How to cite this record FAIRsharing.org: FlowRepository; FlowRepository; DOI: https://doi.org/10.25504/FAIRsharing.veg2d6; Last edited: July 2, 2019, 11:29 a.m.; Last accessed: Oct 20 2021 12:31 a.m.

Publication for citation FlowRepository: a resource of annotated flow cytometry datasets associated with peer-reviewed publications Spidlen J, Breuer K, Rosenberg C, Kotecha N, Brinkman RR; Cytometry A ; 2012; 10.1002/cyto.a.22106;

This record is maintained by rbrinkman ORCID

Record updated: July 2, 2019, 11:28 a.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.veg2d6' by 'The FAIRsharing Team' at 11:28, 02 Jul 2019 (approved):

	'organizations' has been modified:
		Before:
			International Society for Advancement of Cytometry (ISAC)|http://isac-net.org|Funds
			Wallace H Coulter Foundation|http://www.whcf.org|Funds
		After:
			International Society for Advancement of Cytometry (ISAC)|http://isac-net.org|Funds
			Wallace H Coulter Foundation|http://www.whcf.org|Funds
			Terry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia, Canada|http://www.terryfoxlab.ca/|Maintains
		Added:
			Terry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia, Canada|http://www.terryfoxlab.ca/|Maintains
		Removed:

	'supportLinks' has been modified:
		Before:
			contact form|http://flowrepository.org/support_ticket
			online documentation|http://flowrepository.org/quick_start_guide
		After:
			FAQ|http://flowrepository.org/faq
			contact form|http://flowrepository.org/support_ticket
			help|http://flowrepository.org/quick_start_guide
		Added:
			FAQ|http://flowrepository.org/faq
			help|http://flowrepository.org/quick_start_guide
		Removed:
			online documentation|http://flowrepository.org/quick_start_guide

	'onto_disciplines' has been modified:
		Before:
			Life Sciences
		After:
			Biology
			Cell Biology
			Life Sciences
		Added:
			Biology
			Cell Biology
		Removed:

	'dataProcesses' has been modified:
		Before:
			continuous release
			Submission interface
			Search interface
		After:
			Browse Community Datasets
			Submit
			Browse Public Datasets
			Browse Most Popular Datasets
			Browse OMIP Datasets
		Added:
			Browse Community Datasets
			Submit
			Browse Public Datasets
			Browse Most Popular Datasets
			Browse OMIP Datasets
		Removed:
			continuous release
			Submission interface
			Search interface

	'miriam_id' has been modified:
		Before: None
		After: 

	'onto_domains' has been modified:
		Before:
			flow cytometry assay
		After:
			cell
			cellular assay
			flow cytometry assay
		Added:
			cell
			cellular assay
		Removed:

	'accessPoints' has been modified:
		Before:
		After:
			REST|http://flowrepository.org/images/pdf/FlowRepositoryAPI.pdf|FlowRepository API
		Added:
			REST|http://flowrepository.org/images/pdf/FlowRepositoryAPI.pdf|FlowRepository API
		Removed:

In Collections

Data Citation Implementation

Support

General

FAQ	FAQ
contact form	Contact Support
help	Quick Start Guide

Additional Information

Contact

Ryan Brinkman ORCID

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Curation

Submit

http://flowrepository.org/experiments/new

Data Access

Browse Community Datasets	http://flowrepository.org/public_experiment_representations?project=1
Browse Public Datasets	http://flowrepository.org/public_experiment_representations
Browse Most Popular Datasets	http://flowrepository.org/public_experiment_representations?top=10
Browse OMIP Datasets	http://flowrepository.org/public_experiment_representations?project=5

REST Web Services

FlowRepository API

http://flowrepository.org/images/pdf/FlowRepositoryAPI.pdf

Publications

FlowRepository: a resource of annotated flow cytometry datasets associated with peer-reviewed publications

Spidlen J, Breuer K, Rosenberg C, Kotecha N, Brinkman RR
Cytometry A 2012

View Paper (PubMed) View Publication

Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) compliant manuscript using the International Society for Advancement of Cytometry (ISAC) FCS file repository (FlowRepository.org).

Spidlen J,Breuer K,Brinkman R
Curr Protoc Cytom 2012

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

Minimum Information about Flow Cytometry

Terminology Artifacts

No semantic standards defined

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

No related databases defined

Implementing Policies

Credit

Record Maintainer

This record is maintained by rbrinkman ORCID

Funds

International Society for Advancement of Cytometry (ISAC) (Consortium)
Wallace H Coulter Foundation (Charitable foundation)

Maintains

Terry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia, Canada (Lab) Lead

FlowRepository

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