Structural Classification Of Proteins

Abbreviation:SCOP

General Information

The SCOP database is a curated both manually and with the use of automated tools. This freely available resource aims to provide a comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known.

Homepage http://scop.mrc-lmb.cam.ac.uk/scop

Countries that developed this resource United Kingdom

Created in 1994

Taxonomic range

All

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: SCOP; Structural Classification Of Proteins; DOI: https://doi.org/10.25504/FAIRsharing.wjzty; Last edited: April 26, 2021, 11:38 a.m.; Last accessed: Jun 21 2021 11:30 p.m.

Record updated: April 20, 2021, 1:46 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.wjzty' by 'The FAIRsharing Team' at 13:46, 20 Apr 2021 (approved):

	'licences' has been modified:
		Before:
			Attribution required||Data
			Publicly available data||Data
		After:
			SCOP Attribution required|http://scop.mrc-lmb.cam.ac.uk/|Data
		Added:
			SCOP Attribution required|http://scop.mrc-lmb.cam.ac.uk/|Data
		Removed:
			Attribution required||Data
			Publicly available data||Data

	'onto_domains' has been modified:
		Before:
			polypeptide_region
			protein
			structure
		After:
			Structure
			polypeptide_region
			protein
			structure
		Added:
			Structure
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.wjzty' by 'The FAIRsharing Team' at 11:56, 02 Nov 2016 (approved):

	'description' has been modified:
		Before: The SCOP database is a curated both manually and with the use of automated tools. The freely available  resources aims to provide a comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known. Providing researchers with information on the family and superfamily connectivity of proteins.
		After: The SCOP database is a curated both manually and with the use of automated tools. This freely available resource aims to provide a comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known.

Edits to 'https://fairsharing.org/FAIRsharing.wjzty' by 'The FAIRsharing Team' at 21:11, 03 Oct 2016 (approved):

	'description' has been modified:
		Before: The SCOP database, created by manual inspection and abetted by a battery of automated methods, aims to provide a detailed and comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known.
		After: The SCOP database is a curated both manually and with the use of automated tools. The freely available  resources aims to provide a comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known. Providing researchers with information on the family and superfamily connectivity of proteins.

Support

General

help	http://scop.mrc-lmb.cam.ac.uk/scop/help. ...

Additional Information

Contact

General contact

TeSS training resources

Scop

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

SCOP Attribution required

Data Access

Download	http://scop.mrc-lmb.cam.ac.uk/scop/parse/index.html
browse	http://scop.mrc-lmb.cam.ac.uk/scop/data/scop.b.html
search	http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?

Publications

SCOP: a structural classification of proteins database.

Hubbard TJ., Murzin AG., Brenner SE., Chothia C.,
Nucleic Acids Res. 1997

View Paper (PubMed)

SCOP: a Structural Classification of Proteins database.

Hubbard TJ., Ailey B., Brenner SE., Murzin AG., Chothia C.,
Nucleic Acids Res. 1999

View Paper (PubMed)

SCOP, Structural Classification of Proteins database: applications to evaluation of the effectiveness of sequence alignment methods and statistics of protein structural data.

Hubbard TJ., Ailey B., Brenner SE., Murzin AG., Chothia C.,
Acta Crystallogr. D Biol. Crystallogr. 1998

View Paper (PubMed)

SCOP: a structural classification of proteins database.

Lo Conte L., Ailey B., Hubbard TJ., Brenner SE., Murzin AG., Chothia C.,
Nucleic Acids Res. 2000

View Paper (PubMed)

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

Protein Data Bank Format

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

National Institutes of Health (NIH), Bethesda, MD, USA (Government body)
Medical Research Council (MRC), London, UK (Government body)

Maintains

MRC Laboratory of Molecular Biology (LMB), Cambridge, UK (Government body)

Structural Classification Of Proteins

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