FlyBase

Recommended

General Information

Genetic, genomic and molecular information pertaining to the model organism Drosophila melanogaster and related sequences. This database also contains information relating to human disease models in Drosophila, the use of transgenic constructs containing sequence from other organisms in Drosophila, and information on where to buy Drosophila strains and constructs.

Homepage http://flybase.org/

Countries that developed this resource United Kingdom , United States

Created in 1992

Taxonomic range

Drosophila melanogaster

Drosophila mojavensis

Drosophila persimilis

Drosophila pseudoobscura

Drosophila sechellia

Drosophila simulans

Drosophila virilis

Drosophila willistoni

Drosophila yakuba

Knowledge Domains

Subjects

In the following recommendations:

How to cite this record FAIRsharing.org: FlyBase; FlyBase; DOI: https://doi.org/10.25504/FAIRsharing.wrvze3; Last edited: March 6, 2019, 11:15 a.m.; Last accessed: Dec 14 2019 2:57 a.m.

This record is maintained by ctabone

Record updated: March 1, 2019, 3:50 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 15:48, 01 Mar 2019 (approved):

	'onto_disciplines' has been modified:
		Before:
			Anatomy
			Life Sciences
		After:
			Anatomy
			Bioinformatics
			Comparative Genomics
			Data Submission, Annotation and Curation
			Functional Genomics
			Genetics
			Genomics
			Life Sciences
			Molecular Genetics
			Molecular biology
		Added:
			Bioinformatics
			Comparative Genomics
			Data Submission, Annotation and Curation
			Functional Genomics
			Genetics
			Genomics
			Molecular Genetics
			Molecular biology
		Removed:

	'onto_domains' has been modified:
		Before:
			Bibliography
			Citation
			Clone library
			GO-term enrichment report
			Gene name
			Image
			Recombinant DNA
			allele
			cell line
			chromosomal aberration
			gene
			gene model annotation
			genome
			insertion_sequence
			molecular interaction
			phenotype
			resource collection
			sequence_feature
			single balancer
			transposable_element
		After:
			Bibliography
			Biocuration
			CRISPR
			Citation
			Clone library
			GO-term enrichment report
			Gene expression data
			Gene name
			Image
			Pathway or network prediction
			Protein interactions
			RNA interference
			Recombinant DNA
			allele
			cDNA
			cell line
			chromosomal aberration
			digital curation
			gene
			gene model annotation
			genome
			insertion_sequence
			literature curation
			molecular interaction
			molecular_function
			orthologous
			phenotype
			regulatory_region
			resource collection
			sequence_feature
			single balancer
			transposable_element
		Added:
			Biocuration
			CRISPR
			Gene expression data
			Pathway or network prediction
			Protein interactions
			RNA interference
			cDNA
			digital curation
			literature curation
			molecular_function
			orthologous
			regulatory_region
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 11:28, 26 Feb 2019 (approved):

	'supportLinks' has been modified:
		Before:
			contact form|http://flybase.org/cgi-bin/mailto-fbhelp.html
			twitter|@flybasedotorg
			wikipedia|https://en.wikipedia.org/wiki/FlyBase
		After:
			contact form|http://flybase.org/contact/email
			online documentation|https://wiki.flybase.org/wiki/FlyBase:FlyBase_Help_Index
			training|https://www.youtube.com/c/FlyBaseTV
			twitter|@flybasedotorg
			wikipedia|https://en.wikipedia.org/wiki/FlyBase
		Added:
			contact form|http://flybase.org/contact/email
			online documentation|https://wiki.flybase.org/wiki/FlyBase:FlyBase_Help_Index
			training|https://www.youtube.com/c/FlyBaseTV
		Removed:
			contact form|http://flybase.org/cgi-bin/mailto-fbhelp.html

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 11:00, 26 Feb 2019 (approved):

	'tools' has been modified:
		Before:
			BLAST||http://flybase.org/blast/
			CytoSearch||http://flybase.org/static_pages/cytosearch/cytosearch15.html
			Interaction Browser||http://flybase.org/cgi-bin/get_interactions.html
			Feature Mapper||http://flybase.org/static_pages/featuremapper/featuremapper.html
			RNA-Seq by Region||http://flybase.org/static_pages/rna-seq/rnaseqmapper.html
		After:
			Coordinate Converter||http://flybase.org/convert/coordinates
		Added:
			Coordinate Converter||http://flybase.org/convert/coordinates
		Removed:
			BLAST||http://flybase.org/blast/
			CytoSearch||http://flybase.org/static_pages/cytosearch/cytosearch15.html
			Interaction Browser||http://flybase.org/cgi-bin/get_interactions.html
			Feature Mapper||http://flybase.org/static_pages/featuremapper/featuremapper.html
			RNA-Seq by Region||http://flybase.org/static_pages/rna-seq/rnaseqmapper.html

	'dataProcesses' has been modified:
		Before:
			every five week release
			manual curation
			access to historical files available upon request
			file download(txt)
			XML web service
			FTP
			Query builder
			RNA-Seq profile search
			Image browser
			Genome browser
			Data submission 
		After:
			every five week release
			manual curation
			access to historical files available upon request
			file download(txt)
			XML web service
			FTP
			Query builder
			RNA-Seq profile search
			Image browser
			GBrowse
			Data submission 
			Quick search
			Vocabularies Search Page
			Batch Download
			BLAST
			JBrowse
			Chromosome maps
			Feature Mapper
			Sequence Downloader
			RNA-Seq Profile
			RNA-Seq Similarity
			RNA-Seq By Region
			Interactions Browser
			Find a Person
			Update an Address
			RNA-Seq by Region
			CytoSearch
		Added:
			GBrowse
			Quick search
			Vocabularies Search Page
			Batch Download
			BLAST
			JBrowse
			Chromosome maps
			Feature Mapper
			Sequence Downloader
			RNA-Seq Profile
			RNA-Seq Similarity
			RNA-Seq By Region
			Interactions Browser
			Find a Person
			Update an Address
			RNA-Seq by Region
			CytoSearch
		Removed:
			Genome browser

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 17:53, 25 Feb 2019 (approved):

	'grants' has been modified:
		Before:
			G1000968
			MR/N030117/1
			U41HG000739
		After:
			G05000293
			G1000968
			G9535792MB
			MR/N030117/1
			P41-HG00739
			U41HG000739
		Added:
			G05000293
			G9535792MB
			P41-HG00739
		Removed:

	'publications' has been modified:
		Before:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase portals to human disease research using Drosophila models.|Millburn GH,Crosby MA,Gramates LS,Tweedie S|Dis Model Mech|2016
			FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.|dos Santos G,Schroeder AJ,Goodman JL,Strelets VB,Crosby MA,Thurmond J,Emmert DB,Gelbart WM|Nucleic Acids Res|2014
		After:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase portals to human disease research using Drosophila models.|Millburn GH,Crosby MA,Gramates LS,Tweedie S|Dis Model Mech|2016
			FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.|dos Santos G,Schroeder AJ,Goodman JL,Strelets VB,Crosby MA,Thurmond J,Emmert DB,Gelbart WM|Nucleic Acids Res|2014
			FlyBase : a database for the Drosophila research community.|Drysdale R|Methods Mol Biol|2008
			FlyBase: anatomical data, images and queries.|Grumbling G,Strelets V|Nucleic Acids Res|2005
			FlyBase: genes and gene models.|Drysdale RA,Crosby MA|Nucleic Acids Res|2004
			The FlyBase database of the Drosophila genome projects and community literature.||Nucleic Acids Res|2003
			The FlyBase database of the Drosophila genome projects and community literature.||Nucleic Acids Res|2001
			The FlyBase database of the Drosophila Genome Projects and community literature.||Nucleic Acids Res|1998
			FlyBase: a Drosophila database.||Nucleic Acids Res|1998
			FlyBase: the Drosophila database.||Nucleic Acids Res|1996
			FlyBase: a Drosophila database. The FlyBase consortium.|Gelbart WM,Crosby M,Matthews B,Rindone WP,Chillemi J,Russo Twombly S,Emmert D,Ashburner M,Drysdale RA,Whitfield E,Millburn GH,de Grey A,Kaufman T,Matthews K,Gilbert D,Strelets V,Tolstoshev C|Nucleic Acids Res|1997
			FlyBase--the Drosophila database. The FlyBase Consortium.||Nucleic Acids Res|1994
			FlyBase--the Drosophila genetic database.|Ashburner M,Drysdale R|Development|1994
		Added:
			FlyBase : a database for the Drosophila research community.|Drysdale R|Methods Mol Biol|2008
			FlyBase: anatomical data, images and queries.|Grumbling G,Strelets V|Nucleic Acids Res|2005
			FlyBase: genes and gene models.|Drysdale RA,Crosby MA|Nucleic Acids Res|2004
			The FlyBase database of the Drosophila genome projects and community literature.||Nucleic Acids Res|2003
			The FlyBase database of the Drosophila genome projects and community literature.||Nucleic Acids Res|2001
			The FlyBase database of the Drosophila Genome Projects and community literature.||Nucleic Acids Res|1998
			FlyBase: a Drosophila database.||Nucleic Acids Res|1998
			FlyBase: the Drosophila database.||Nucleic Acids Res|1996
			FlyBase: a Drosophila database. The FlyBase consortium.|Gelbart WM,Crosby M,Matthews B,Rindone WP,Chillemi J,Russo Twombly S,Emmert D,Ashburner M,Drysdale RA,Whitfield E,Millburn GH,de Grey A,Kaufman T,Matthews K,Gilbert D,Strelets V,Tolstoshev C|Nucleic Acids Res|1997
			FlyBase--the Drosophila database. The FlyBase Consortium.||Nucleic Acids Res|1994
			FlyBase--the Drosophila genetic database.|Ashburner M,Drysdale R|Development|1994
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 17:19, 25 Feb 2019 (approved):

	'publications' has been modified:
		Before:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase portals to human disease research using Drosophila models.|Millburn GH,Crosby MA,Gramates LS,Tweedie S|Dis Model Mech|2016
		After:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase portals to human disease research using Drosophila models.|Millburn GH,Crosby MA,Gramates LS,Tweedie S|Dis Model Mech|2016
			FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.|dos Santos G,Schroeder AJ,Goodman JL,Strelets VB,Crosby MA,Thurmond J,Emmert DB,Gelbart WM|Nucleic Acids Res|2014
		Added:
			FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.|dos Santos G,Schroeder AJ,Goodman JL,Strelets VB,Crosby MA,Thurmond J,Emmert DB,Gelbart WM|Nucleic Acids Res|2014
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 17:14, 25 Feb 2019 (approved):

	'publications' has been modified:
		Before:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
		After:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase portals to human disease research using Drosophila models.|Millburn GH,Crosby MA,Gramates LS,Tweedie S|Dis Model Mech|2016
		Added:
			FlyBase portals to human disease research using Drosophila models.|Millburn GH,Crosby MA,Gramates LS,Tweedie S|Dis Model Mech|2016
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 17:07, 25 Feb 2019 (approved):

	'publications' has been modified:
		Before:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
		After:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
		Added:
			Exploring FlyBase Data Using QuickSearch.|Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J|Curr Protoc Bioinformatics|2016
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 16:44, 25 Feb 2019 (approved):

	'grants' has been modified:
		Before:
		After:
			G1000968
			MR/N030117/1
			U41HG000739
		Added:
			G1000968
			MR/N030117/1
			U41HG000739
		Removed:

	'publications' has been modified:
		Before:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
		After:
			FlyBase: enhancing Drosophila Gene Ontology annotations.|Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H., |Nucleic Acids Res.|2009
			FlyBase: integration and improvements to query tools.|Wilson RJ., Goodman JL., Strelets VB., |Nucleic Acids Res.|2008
			FlyBase: genomes by the dozen.|Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM., |Nucleic Acids Res.|2007
			FlyBase 102--advanced approaches to interrogating FlyBase.|St Pierre SE,Ponting L,Stefancsik R,McQuilton P|Nucleic Acids Res|2013
			FlyBase 101--the basics of navigating FlyBase.|McQuilton P,St Pierre SE,Thurmond J|Nucleic Acids Res|2011
			Directly e-mailing authors of newly published papers encourages community curation.|Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH|Database (Oxford)|2012
			FlyBase: establishing a Gene Group resource for Drosophila melanogaster.|Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ|Nucleic Acids Res|2015
			Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.|Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.|Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM|G3 (Bethesda)|2015
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
		Added:
			FlyBase 2.0: the next generation.|Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR|Nucleic Acids Res|2018
			Using FlyBase to Find Functionally Related Drosophila Genes.|Rey AJ,Attrill H,Marygold SJ|Methods Mol Biol|2018
			FlyBase at 25: looking to the future.|Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P|Nucleic Acids Res|2016
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.wrvze3' by 'The FAIRsharing Team' at 11:23, 25 Feb 2019 (approved):

	'related_databases' has been modified:
		Before:
			DRSC Functional Genomics Resources
			Saccharomyces Genome Database
			WormBase
			GenomeRNAi
			Berkeley Drosophila Genome Project EST database
			STRING
			Rat Genome Database
			Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource
			The Zebrafish Information Network
			FlyMine
			Virtual Fly Brain
			Alliance of Genome Resources
			Regulatory Element Database for Drosophila
		After:
			DRSC Functional Genomics Resources
			Saccharomyces Genome Database
			WormBase
			GenomeRNAi
			Berkeley Drosophila Genome Project EST database
			HUGO Gene Nomenclature Committee 
			STRING
			Rat Genome Database
			Mouse Genome Database - a Mouse Genome Informatics (MGI) Resource
			Biological General Repository for Interaction Datasets
			The Zebrafish Information Network
			VectorBase
			FlyMine
			Virtual Fly Brain
			Alliance of Genome Resources
			Hymenoptera Genome Database
			Regulatory Element Database for Drosophila
			SignaLink
		Added:
			HUGO Gene Nomenclature Committee 
			Biological General Repository for Interaction Datasets
			VectorBase
			Hymenoptera Genome Database
			SignaLink
		Removed:

In Collections

Open Science Prize

NIH-supported data repositories

Support

General

contact form	http://flybase.org/contact/email
online documentation	Help index
training	FlyBase TV - Youtube
twitter	@flybasedotorg
wikipedia	https://en.wikipedia.org/wiki/FlyBase

Tools

Coordinate Converter

http://flybase.org/convert/coordinates

Access / Retrieve Data

Conditions of Use

Data Versioning

access to historical files available upon request

http://flybase.org/static_pages/downloads/archivedata3.html

Data Curation

manual curation	No link recorded
Data submission	http://flybase.org/submission/publication/
Update an Address	http://flybase.org/community/update

Data Access

XML web service	No link recorded
FTP	http://flybase.org/wiki/FlyBase:FilesOverview
RNA-Seq profile search	http://flybase.org/static_pages/rna-seq/rna-seq_profile_search.html
file download(txt)	No link recorded
Query builder	http://flybase.org/cgi-bin/qb.pl
GBrowse	http://flybase.org/cgi-bin/gbrowse2/dmel/
Image browser	http://flybase.org/cgi-bin/get_static_page.pl?file=imagebrowser10.html ...
Quick search	http://flybase.org/
Vocabularies Search Page	http://flybase.org/vocabularies
Batch Download	http://flybase.org/batchdownload
BLAST	http://flybase.org/blast/
JBrowse	http://flybase.org/jbrowse/?data=data%2Fjson%2Fdmel&loc=2R%3A13437068. ...
Chromosome maps	http://flybase.org/maps/chromosomes/maps
Feature Mapper	http://flybase.org/featuremapper
Sequence Downloader	http://flybase.org/download/sequence/
RNA-Seq Profile	http://flybase.org/rnaseq/profile_search
RNA-Seq Similarity	http://flybase.org/rnaseq/simsearch
RNA-Seq By Region	http://flybase.org/rnaseq/region
Interactions Browser	http://flybase.org/cgi-bin/get_interactions.pl
Find a Person	http://flybase.org/community/find
RNA-Seq by Region	http://flybase.org/static_pages/rna-seq/rnaseqmapper.html
CytoSearch	http://flybase.org/cytosearch

Data Release

every five week release

No link recorded

REST Web Services

ML via ID	http://www.biocatalogue.org/rest_methods/111
ML via symbol	http://www.biocatalogue.org/rest_methods/112

Publications

The FlyBase database of the Drosophila genome projects and community literature.

Nucleic Acids Res 2001

View Paper (PubMed)

FlyBase: a Drosophila database.

Nucleic Acids Res 1998

View Paper (PubMed)

FlyBase--the Drosophila database. The FlyBase Consortium.

Nucleic Acids Res 1994

View Paper (PubMed)

The FlyBase database of the Drosophila Genome Projects and community literature.

Nucleic Acids Res 1998

View Paper (PubMed)

FlyBase: the Drosophila database.

Nucleic Acids Res 1996

View Paper (PubMed)

FlyBase--the Drosophila genetic database.

Ashburner M,Drysdale R
Development 1994

View Paper (PubMed)

FlyBase : a database for the Drosophila research community.

Drysdale R
Methods Mol Biol 2008

View Paper (PubMed) View Publication

FlyBase: anatomical data, images and queries.

Grumbling G,Strelets V
Nucleic Acids Res 2005

View Paper (PubMed) View Publication

FlyBase: genes and gene models.

Drysdale RA,Crosby MA
Nucleic Acids Res 2004

View Paper (PubMed) View Publication

The FlyBase database of the Drosophila genome projects and community literature.

Nucleic Acids Res 2003

View Paper (PubMed)

FlyBase: a Drosophila database. The FlyBase consortium.

Gelbart WM,Crosby M,Matthews B,Rindone WP,Chillemi J,Russo Twombly S,Emmert D,Ashburner M,Drysdale RA,Whitfield E,Millburn GH,de Grey A,Kaufman T,Matthews K,Gilbert D,Strelets V,Tolstoshev C
Nucleic Acids Res 1997

View Paper (PubMed)

FlyBase 102--advanced approaches to interrogating FlyBase.

St Pierre SE,Ponting L,Stefancsik R,McQuilton P
Nucleic Acids Res 2013

View Paper (PubMed) View Publication

FlyBase: enhancing Drosophila Gene Ontology annotations.

Tweedie S., Ashburner M., Falls K., Leyland P., McQuilton P., Marygold S., Millburn G., Osumi-Sutherland D., Schroeder A., Seal R., Zhang H.,
Nucleic Acids Res. 2009

View Paper (PubMed) View Publication

FlyBase: integration and improvements to query tools.

Wilson RJ., Goodman JL., Strelets VB.,
Nucleic Acids Res. 2008

View Paper (PubMed) View Publication

FlyBase: genomes by the dozen.

Crosby MA., Goodman JL., Strelets VB., Zhang P., Gelbart WM.,
Nucleic Acids Res. 2007

View Paper (PubMed) View Publication

FlyBase 101--the basics of navigating FlyBase.

McQuilton P,St Pierre SE,Thurmond J
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

Directly e-mailing authors of newly published papers encourages community curation.

Bunt SM,Grumbling GB,Field HI,Marygold SJ,Brown NH,Millburn GH
Database (Oxford) 2012

View Paper (PubMed) View Publication

FlyBase: establishing a Gene Group resource for Drosophila melanogaster.

Attrill H,Falls K,Goodman JL,Millburn GH,Antonazzo G,Rey AJ,Marygold SJ
Nucleic Acids Res 2015

View Paper (PubMed) View Publication

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM
G3 (Bethesda) 2015

View Paper (PubMed) View Publication

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM
G3 (Bethesda) 2015

View Paper (PubMed) View Publication

Using FlyBase to Find Functionally Related Drosophila Genes.

Rey AJ,Attrill H,Marygold SJ
Methods Mol Biol 2018

View Paper (PubMed) View Publication

FlyBase at 25: looking to the future.

Gramates LS,Marygold SJ,Santos GD,Urbano JM,Antonazzo G,Matthews BB,Rey AJ,Tabone CJ,Crosby MA,Emmert DB,Falls K,Goodman JL,Hu Y,Ponting L,Schroeder AJ,Strelets VB,Thurmond J,Zhou P
Nucleic Acids Res 2016

View Paper (PubMed) View Publication

FlyBase 2.0: the next generation.

Thurmond J,Goodman JL,Strelets VB,Attrill H,Gramates LS,Marygold SJ,Matthews BB,Millburn G,Antonazzo G,Trovisco V,Kaufman TC,Calvi BR
Nucleic Acids Res 2018

View Paper (PubMed) View Publication

Using FlyBase to Find Functionally Related Drosophila Genes.

Rey AJ,Attrill H,Marygold SJ
Methods Mol Biol 2018

View Paper (PubMed) View Publication

Exploring FlyBase Data Using QuickSearch.

Marygold SJ,Antonazzo G,Attrill H,Costa M,Crosby MA,Dos Santos G,Goodman JL,Gramates LS,Matthews BB,Rey AJ,Thurmond J
Curr Protoc Bioinformatics 2016

View Paper (PubMed) View Publication

FlyBase portals to human disease research using Drosophila models.

Millburn GH,Crosby MA,Gramates LS,Tweedie S
Dis Model Mech 2016

View Paper (PubMed) View Publication

FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.

dos Santos G,Schroeder AJ,Goodman JL,Strelets VB,Crosby MA,Thurmond J,Emmert DB,Gelbart WM
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

Research Resource Identifiers

Metrics

No metrics standards defined

Related Databases

Implementing Policies

Credit

Record Maintainer

This record is maintained by ctabone

Funds

National Human Genome Research Institute (NHGRI), Bethesda, MD, USA (Government body)
Medical Research Council (MRC), London, UK (Government body)

Maintains

FlyBase administrators (Consortium)

Grant Number(s)

G05000293 (Medical Research Council (MRC), London, UK)
G1000968 (Medical Research Council (MRC), London, UK)
G9535792MB (Medical Research Council (MRC), London, UK)
MR/N030117/1 (Medical Research Council (MRC), London, UK)
P41-HG00739 (National Human Genome Research Institute (NHGRI), Bethesda, MD, USA)
U41HG000739 (National Human Genome Research Institute (NHGRI), Bethesda, MD, USA)

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