How to cite this record
FAIRsharing.org: MIPModDB; Major Intrinsic Proteins Modification Database; DOI: https://doi.org/10.25504/FAIRsharing.yd76dk;
Last edited: Feb. 12, 2019, 2:23 p.m.; Last accessed: Apr 11 2021 1:02 p.m.
Publication for citation
MIPModDB: a central resource for the superfamily of major intrinsic proteins.
Gupta AB,Verma RK,Agarwal V,Vajpai M,Bansal V,Sankararamakrishnan R; Nucleic Acids Res ;
2011;
10.1093/nar/gkr914;
Edits to 'https://fairsharing.org/FAIRsharing.yd76dk' by 'The FAIRsharing Team' at 14:23, 12 Feb 2019 (approved):
'standardsImplemented' has been modified:
Before:
GenBank Sequence Format
FASTA Sequence Format
Protein Data Bank Format
Protein InFormation Resource Format
CLUSTAL-W Dendrogram Guide File Format
UniProtKB XML Format
After:
GenBank Sequence Format
FASTA Sequence Format
Protein Data Bank Format
Protein InFormation Resource Format
UniProtKB XML Format
Added:
Removed:
CLUSTAL-W Dendrogram Guide File Format
'supportLinks' has been modified:
Before:
FAQ|http://bioinfo.iitk.ac.in/MIPModDB/help.html
contact form|http://bioinfo.iitk.ac.in/MIPModDB/feedback.html
wikipedia|https://en.wikipedia.org/wiki/MIPModDB
After:
FAQ|http://bioinfo.iitk.ac.in/MIPModDB/help.html
contact form|http://bioinfo.iitk.ac.in/MIPModDB/feedback.html
online documentation|http://bioinfo.iitk.ac.in/MIPModDB/statistics.php
wikipedia|https://en.wikipedia.org/wiki/MIPModDB
Added:
online documentation|http://bioinfo.iitk.ac.in/MIPModDB/statistics.php
Removed:
'name' has been modified:
Before: MIPModDB: A Central Resource for the Superfamily of Major Intrinsic Proteins
After: Major Intrinsic Proteins Modification Database
'yearOfCreation' has been modified:
Before: 2011
After: 2007
'dataProcesses' has been modified:
Before:
file download(images)
access to historical files available
search
manual curation
ad-hoc release
After:
search
Added:
Removed:
file download(images)
access to historical files available
manual curation
ad-hoc release
'contactEmail' has been modified:
Before:
After: rsankar@iitk.ac.in
'contact' has been modified:
Before:
After: R. SankaraRamakrishnan
'miriam_id' has been modified:
Before: None
After:
'publications' has been modified:
Before:
Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective.|Gupta AB., Sankararamakrishnan R., |BMC Plant Biol.|2009
Homology modeling of major intrinsic proteins in rice, maize and Arabidopsis: comparative analysis of transmembrane helix association and aromatic/arginine selectivity filters.|Bansal A., Sankararamakrishnan R., |BMC Struct. Biol.|2007
After:
Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective.|Gupta AB., Sankararamakrishnan R., |BMC Plant Biol.|2009
Homology modeling of major intrinsic proteins in rice, maize and Arabidopsis: comparative analysis of transmembrane helix association and aromatic/arginine selectivity filters.|Bansal A., Sankararamakrishnan R., |BMC Struct. Biol.|2007
MIPModDB: a central resource for the superfamily of major intrinsic proteins.|Gupta AB,Verma RK,Agarwal V,Vajpai M,Bansal V,Sankararamakrishnan R|Nucleic Acids Res|2011
Added:
MIPModDB: a central resource for the superfamily of major intrinsic proteins.|Gupta AB,Verma RK,Agarwal V,Vajpai M,Bansal V,Sankararamakrishnan R|Nucleic Acids Res|2011
Removed:
'shortname' has been modified:
Before: MIPModDB: A Central Resource for the Superfamily of Major Intrinsic Proteins
After: MIPModDB
'description' has been modified:
Before: This is a database of comparative protein structure models of MIP (Major Intrinsic Protein) family of proteins. The nearly completed sets of MIPs have been identified from the completed genome sequence of organisms available at NCBI. The structural models of MIP proteins were created by defined protocol. The database aims to provide key information of MIPs in particular based on sequence as well as structures. This will further help to decipher the function of uncharacterized MIPs.
After: This is a database of comparative protein structure models of the MIP (Major Intrinsic Protein) family of proteins. The MIPs have been identified from the completed genome sequence of organisms available at NCBI.
Edits to 'https://fairsharing.org/FAIRsharing.yd76dk' by 'The FAIRsharing Team' at 11:40, 14 Nov 2017 (approved):
'domains' has been modified:
Before:
Channel radius profile||
Gene|property|http://purl.obolibrary.org/obo/SO_0000704
Gene structure||http://edamontology.org/topic_0114
Life Science|domain|
NPA substitution||
Phylogenetics|property|http://edamontology.org/topic_3293
Selectivity filter residues||
Structure-based sequence alignment||http://edamontology.org/operation_0294
After:
Channel radius profile||
Gene|property|http://purl.obolibrary.org/obo/SO_0000704
Gene structure||http://edamontology.org/topic_0114
Life Science|domain|
NPA substitution||
Phylogenetics|property|http://edamontology.org/topic_3293
Selectivity filter residues||
Structure-based sequence alignment||http://edamontology.org/operation_0294
Homologous||http://purl.obolibrary.org/obo/SO_0000857
Added:
Homologous||http://purl.obolibrary.org/obo/SO_0000857
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.yd76dk' by 'The FAIRsharing Team' at 10:19, 18 Aug 2016 (approved):
'description' has been modified:
Before: Major Intrinsic Protein superfamily Models
After: This is a database of comparative protein structure models of MIP (Major Intrinsic Protein) family of proteins. The nearly completed sets of MIPs have been identified from the completed genome sequence of organisms available at NCBI. The structural models of MIP proteins were created by defined protocol. The database aims to provide key information of MIPs in particular based on sequence as well as structures. This will further help to decipher the function of uncharacterized MIPs.