Edits to 'https://fairsharing.org/FAIRsharing.m3jtpg' by 'The FAIRsharing Team' at 13:46, 11 Feb 2020 (approved):
'standardsImplemented' has been modified:
Before:
Chemical Entities of Biological Interest
BRENDA tissue / enzyme source
CHEMical INFormation Ontology
Units Ontology
BioAssay Ontology
Cell Line Ontology
PRotein Ontology
UBER anatomy ONtology
After:
Chemical Entities of Biological Interest
BRENDA tissue / enzyme source
CHEMical INFormation Ontology
Units Ontology
BioAssay Ontology
Cell Line Ontology
Resource Description Framework
PRotein Ontology
UBER anatomy ONtology
Added:
Resource Description Framework
Removed:
'supportLinks' has been modified:
Before:
FAQ|https://chembl.gitbook.io/chembl-interface-documentation/frequently-asked-questions
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
blog|http://chembl.blogspot.com
online documentation|https://chembl.gitbook.io/chembl-interface-documentation/
online documentation|https://www.ebi.ac.uk/chembl/funding
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
After:
FAQ|https://chembl.gitbook.io/chembl-interface-documentation/frequently-asked-questions
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
blog|https://chembl.blogspot.com/
mailing list|http://listserver.ebi.ac.uk/mailman/listinfo/chembl-announce
online documentation|https://chembl.gitbook.io/chembl-interface-documentation/web-services
online documentation|https://chembl.gitbook.io/chembl-interface-documentation/
online documentation|https://www.ebi.ac.uk/chembl/funding
online documentation|https://github.com/chembl/GLaDOS
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
Added:
blog|https://chembl.blogspot.com/
mailing list|http://listserver.ebi.ac.uk/mailman/listinfo/chembl-announce
online documentation|https://chembl.gitbook.io/chembl-interface-documentation/web-services
online documentation|https://github.com/chembl/GLaDOS
Removed:
blog|http://chembl.blogspot.com
'countries' has been modified:
Before:
United Kingdom
After:
Austria
Belgium
Croatia
Czech Republic
Denmark
Finland
France
Germany
Greece
Hungary
Iceland
Israel
Italy
Lithuania
Luxembourg
Malta
Montenegro
Netherlands
Norway
Portugal
Republic of Ireland
Slovakia
Spain
Sweden
Switzerland
United Kingdom
Added:
Austria
Belgium
Croatia
Czech Republic
Denmark
Finland
France
Germany
Greece
Hungary
Iceland
Israel
Italy
Lithuania
Luxembourg
Malta
Montenegro
Netherlands
Norway
Portugal
Republic of Ireland
Slovakia
Spain
Sweden
Switzerland
Removed:
'licences' has been modified:
Before:
Creative Commons Attribution-ShareAlike 3.0 Unported (CC BY-SA 3.0)|https://creativecommons.org/licenses/by-sa/3.0/|Data
After:
Creative Commons Attribution-ShareAlike 3.0 Unported (CC BY-SA 3.0)|https://creativecommons.org/licenses/by-sa/3.0/|Data
EBI Terms of Use|http://www.ebi.ac.uk/about/terms-of-use|Data
Added:
EBI Terms of Use|http://www.ebi.ac.uk/about/terms-of-use|Data
Removed:
'dataProcesses' has been modified:
Before:
All Releases
Access via EBI RDF
myChEMBL Data Download (FTP)
Browse ChEMBL-NTD
After:
Download
Browse
myChEMBL Data Download (FTP)
Browse ChEMBL-NTD
Browse via Visualization
Added:
Download
Browse
Browse via Visualization
Removed:
All Releases
Access via EBI RDF
'publications' has been modified:
Before:
ChEMBL: a large-scale bioactivity database for drug discovery.|Gaulton A., Bellis LJ., Bento AP., Chambers J., Davies M., Hersey A., Light Y., McGlinchey S., Michalovich D., Al-Lazikani B., Overington JP., |Nucleic Acids Res.|2012
The ChEMBL bioactivity database: an update|Bento AP, Gaulton A, Hersey A, Bellis LJ, Chambers J, Davies M, Krger FA, Light Y, Mak L, McGlinchey S, Nowotka M, Papadatos G, Santos R, Overington JP.|Nucleic Acids Res.|2013
After:
ChEMBL: a large-scale bioactivity database for drug discovery.|Gaulton A., Bellis LJ., Bento AP., Chambers J., Davies M., Hersey A., Light Y., McGlinchey S., Michalovich D., Al-Lazikani B., Overington JP., |Nucleic Acids Res.|2012
The ChEMBL bioactivity database: an update|Bento AP, Gaulton A, Hersey A, Bellis LJ, Chambers J, Davies M, Krger FA, Light Y, Mak L, McGlinchey S, Nowotka M, Papadatos G, Santos R, Overington JP.|Nucleic Acids Res.|2013
The ChEMBL database in 2017.|Gaulton A,Hersey A,Nowotka M,Bento AP,Chambers J,Mendez D,Mutowo P,Atkinson F,Bellis LJ,Cibrian-Uhalte E,Davies M,Dedman N,Karlsson A,Magarinos MP,Overington JP,Papadatos G,Smit I,Leach AR|Nucleic Acids Res|2016
Added:
The ChEMBL database in 2017.|Gaulton A,Hersey A,Nowotka M,Bento AP,Chambers J,Mendez D,Mutowo P,Atkinson F,Bellis LJ,Cibrian-Uhalte E,Davies M,Dedman N,Karlsson A,Magarinos MP,Overington JP,Papadatos G,Smit I,Leach AR|Nucleic Acids Res|2016
Removed:
'tools' has been modified:
Before:
SureChEMBL||https://www.surechembl.org/search/
ChEMBL NTD||https://chembl.gitbook.io/chembl-ntd/
RDF Platform||https://www.ebi.ac.uk/rdf/
UniChem||https://www.ebi.ac.uk/unichem/
After:
SureChEMBL||https://www.surechembl.org/search/
ChEMBL NTD||https://chembl.gitbook.io/chembl-ntd/
UniChem||https://www.ebi.ac.uk/unichem/
Added:
Removed:
RDF Platform||https://www.ebi.ac.uk/rdf/
Edits to 'https://fairsharing.org/FAIRsharing.m3jtpg' by 'agaulton' at 09:20, 13 May 2019 (approved):
'standardsImplemented' has been modified:
Before:
Chemical Entities of Biological Interest
UBER anatomy ONtology
PRotein Ontology
After:
Chemical Entities of Biological Interest
UBER anatomy ONtology
PRotein Ontology
BioAssay Ontology
Added:
BioAssay Ontology
Removed:
'related_databases' has been modified:
Before:
Guide to Pharmacology
Complex Portal
TargetMine
WITHDRAWN: A Resource for Withdrawn and Discontinued Drugs
After:
BindingDB database of measured binding affinities
Guide to Pharmacology
PubChem
Open Targets
Complex Portal
TargetMine
WITHDRAWN: A Resource for Withdrawn and Discontinued Drugs
Added:
BindingDB database of measured binding affinities
PubChem
Open Targets
Removed:
'supportLinks' has been modified:
Before:
FAQ|https://www.ebi.ac.uk/chembl/faq
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
blog|http://chembl.blogspot.com
online documentation|http://chembl.github.io/status/
online documentation|https://www.ebi.ac.uk/chembl/funding
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
After:
FAQ|https://chembl.gitbook.io/chembl-interface-documentation/frequently-asked-questions
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
blog|http://chembl.blogspot.com
online documentation|https://chembl.gitbook.io/chembl-interface-documentation/
online documentation|https://www.ebi.ac.uk/chembl/funding
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
Added:
FAQ|https://chembl.gitbook.io/chembl-interface-documentation/frequently-asked-questions
online documentation|https://chembl.gitbook.io/chembl-interface-documentation/
Removed:
FAQ|https://www.ebi.ac.uk/chembl/faq
online documentation|http://chembl.github.io/status/
'contactORCID' has been modified:
Before: 0000-0002-5859-1064
After: 0000-0001-8178-0253
'tools' has been modified:
Before:
SureChEMBL||https://www.surechembl.org/search/
ADME SARfari||https://www.ebi.ac.uk/chembl/admesarfari
RDF Platform||https://www.ebi.ac.uk/rdf/
UniChem||https://www.ebi.ac.uk/unichem/
After:
SureChEMBL||https://www.surechembl.org/search/
ChEMBL NTD||https://chembl.gitbook.io/chembl-ntd/
RDF Platform||https://www.ebi.ac.uk/rdf/
UniChem||https://www.ebi.ac.uk/unichem/
Added:
ChEMBL NTD||https://chembl.gitbook.io/chembl-ntd/
Removed:
ADME SARfari||https://www.ebi.ac.uk/chembl/admesarfari
'dataProcesses' has been modified:
Before:
All Releases
Access via EBI RDF
myChEMBL Data Download (FTP)
Browse ChEMBL-NTD
Browse ChEMBL Malaria Subset
After:
All Releases
Access via EBI RDF
myChEMBL Data Download (FTP)
Browse ChEMBL-NTD
Added:
Removed:
Browse ChEMBL Malaria Subset
'contact' has been modified:
Before: John Overington
After: Andrew Leach
'taxonomies' has been modified:
Before:
Not applicable
After:
All
Added:
All
Removed:
Not applicable
'homepage' has been modified:
Before: https://www.ebi.ac.uk/chembldb
After: https://www.ebi.ac.uk/chembl
Edits to 'https://fairsharing.org/FAIRsharing.m3jtpg' by 'The FAIRsharing Team' at 11:39, 17 Jan 2019 (approved):
'onto_domains' has been modified:
Before:
Chemical structure image
bioactivity assay
drug
After:
Chemical structure image
bioactivity assay
drug
small molecule
Added:
small molecule
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.m3jtpg' by 'The FAIRsharing Team' at 11:36, 17 Jan 2019 (approved):
'organizations' has been modified:
Before:
NIH Common Fund, USA|https://commonfund.nih.gov|Funds
Centre for Therapeutic Target Validation, Cambridge, UK|https://www.opentargets.org|Funds
EU-ToxRisk|http://www.eu-toxrisk.eu|Funds
Innovative Medicines Initiative (IMI), Brussles, Belgium|https://www.imi.europa.eu/content/etox|Funds
The CORBEL Project|http://www.corbel-project.eu/home.html|Funds
Wellcome Trust, UK|http://www.wellcome.ac.uk|Funds
European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains
After:
NIH Common Fund, USA|https://commonfund.nih.gov|Funds
Centre for Therapeutic Target Validation, Cambridge, UK|https://www.opentargets.org|Funds
EU-ToxRisk|http://www.eu-toxrisk.eu|Funds
Innovative Medicines Initiative (IMI), Brussles, Belgium|https://www.imi.europa.eu/content/etox|Funds
The CORBEL Project|http://www.corbel-project.eu/home.html|Funds
Wellcome Trust, UK|http://www.wellcome.ac.uk|Funds
European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK|https://www.ebi.ac.uk/|Maintains
Added:
European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK|https://www.ebi.ac.uk/|Maintains
Removed:
Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains
'taxonomies' has been modified:
Before:
After:
Not applicable
Added:
Not applicable
Removed:
'supportLinks' has been modified:
Before:
FAQ|https://www.ebi.ac.uk/chembl/faq
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
help|http://chembl.blogspot.com
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
After:
FAQ|https://www.ebi.ac.uk/chembl/faq
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
blog|http://chembl.blogspot.com
online documentation|http://chembl.github.io/status/
online documentation|https://www.ebi.ac.uk/chembl/funding
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
Added:
blog|http://chembl.blogspot.com
online documentation|http://chembl.github.io/status/
online documentation|https://www.ebi.ac.uk/chembl/funding
Removed:
help|http://chembl.blogspot.com
'countries' has been modified:
Before:
After:
United Kingdom
Added:
United Kingdom
Removed:
'onto_disciplines' has been modified:
Before:
After:
Biochemistry
Drug Discovery
Medicinal Chemistry
Added:
Biochemistry
Drug Discovery
Medicinal Chemistry
Removed:
'onto_domains' has been modified:
Before:
After:
Chemical structure image
bioactivity assay
drug
Added:
Chemical structure image
bioactivity assay
drug
Removed:
'miriam_id' has been modified:
Before:
After: MIR:00000084
'dataProcesses' has been modified:
Before:
quarterly release
manual curation
access to historical files available
web services
file download (text,XLS,SDF exports)
SQL database dump
web-services (XML, JSON)
search
After:
All Releases
Access via EBI RDF
myChEMBL Data Download (FTP)
Browse ChEMBL-NTD
Browse ChEMBL Malaria Subset
Added:
All Releases
Access via EBI RDF
myChEMBL Data Download (FTP)
Browse ChEMBL-NTD
Browse ChEMBL Malaria Subset
Removed:
quarterly release
manual curation
access to historical files available
web services
file download (text,XLS,SDF exports)
SQL database dump
web-services (XML, JSON)
search
'accessPoints' has been modified:
Before:
REST|http://www.biocatalogue.org/rest_methods/174|Compound record bioactivities
REST|http://www.biocatalogue.org/rest_methods/173|Compound Record
REST|http://www.biocatalogue.org/rest_methods/175|target record
REST|http://www.biocatalogue.org/rest_methods/176|target bioactivities
REST|http://www.biocatalogue.org/rest_methods/177|all targets
REST|http://www.biocatalogue.org/rest_methods/178|Fetch assay
REST|http://www.biocatalogue.org/rest_methods/179|Fetch assay bioactivities
REST|http://www.biocatalogue.org/rest_methods/180|target record by RefSeq accession identifier
REST|http://www.biocatalogue.org/rest_methods/181|ChEMBLdb target record by UniProt accession identifier
After:
REST|http://www.biocatalogue.org/rest_methods/174|Compound record bioactivities
REST|http://www.biocatalogue.org/rest_methods/173|Compound Record
REST|http://www.biocatalogue.org/rest_methods/175|target record
REST|http://www.biocatalogue.org/rest_methods/176|target bioactivities
REST|http://www.biocatalogue.org/rest_methods/177|all targets
REST|http://www.biocatalogue.org/rest_methods/178|Fetch assay
REST|http://www.biocatalogue.org/rest_methods/179|Fetch assay bioactivities
REST|http://www.biocatalogue.org/rest_methods/180|target record by RefSeq accession identifier
REST|http://www.biocatalogue.org/rest_methods/181|ChEMBLdb target record by UniProt accession identifier
REST|https://www.ebi.ac.uk/chembl/ws|ChEMBL Web Services
Added:
REST|https://www.ebi.ac.uk/chembl/ws|ChEMBL Web Services
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.m3jtpg' by 'The FAIRsharing Team' at 10:16, 13 Aug 2018 (approved):
'domains' has been modified:
Before:
Approved drug
Biomedical Science
Peptide
Small molecule
After:
Added:
Removed:
Approved drug
Biomedical Science
Peptide
Small molecule
'standardsImplemented' has been modified:
Before:
Chemical Entities of Biological Interest
Molecular Interaction eXtensible Markup Language
PSI Molecular Interaction Controlled Vocabulary
Molecular Interaction Tabular
FASTA Sequence Format
Structure Data Format
Bioschemas
Hierarchical Editing Language for Macromolecules
After:
Added:
Removed:
Chemical Entities of Biological Interest
Molecular Interaction eXtensible Markup Language
PSI Molecular Interaction Controlled Vocabulary
Molecular Interaction Tabular
FASTA Sequence Format
Structure Data Format
Bioschemas
Hierarchical Editing Language for Macromolecules
'taxonomies' has been modified:
Before:
All
After:
Added:
Removed:
All
'related_databases' has been modified:
Before:
Guide to Pharmacology
Wikidata
The Chemical Probes Portal
DrugCentral
Target Central Resource Database
Open Targets
EPA Comptox Chemistry Dashboard
SuperDRUG2 - A One Stop Resource for Approved/Marketed Drugs
After:
Added:
Removed:
Guide to Pharmacology
Wikidata
The Chemical Probes Portal
DrugCentral
Target Central Resource Database
Open Targets
EPA Comptox Chemistry Dashboard
SuperDRUG2 - A One Stop Resource for Approved/Marketed Drugs
'countries' has been modified:
Before:
European Union
After:
Added:
Removed:
European Union
Edits to 'https://fairsharing.org/FAIRsharing.m3jtpg' by 'The FAIRsharing Team' at 09:01, 31 Jul 2018 (approved):
'supportLinks' has been modified:
Before:
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
help|http://chembl.blogspot.com
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
After:
FAQ|https://www.ebi.ac.uk/chembl/faq
TeSS training|https://tess.elixir-europe.org/materials/chembl-quick-tour
TeSS training|https://tess.elixir-europe.org/materials/chembl-walkthrough-webinar
TeSS training|https://tess.elixir-europe.org/materials/chembl-exploring-bioactive-drug-like-molecules
help|http://chembl.blogspot.com
twitter|@chembl
wikipedia|https://en.wikipedia.org/wiki/ChEMBL
Added:
FAQ|https://www.ebi.ac.uk/chembl/faq
Removed:
'tools' has been modified:
Before:
search tool||https://www.ebi.ac.uk/chembldb/
web-services||https://www.ebi.ac.uk/chembl/ws
After:
SureChEMBL||https://www.surechembl.org/search/
ADME SARfari||https://www.ebi.ac.uk/chembl/admesarfari
RDF Platform||https://www.ebi.ac.uk/rdf/
UniChem||https://www.ebi.ac.uk/unichem/
Added:
SureChEMBL||https://www.surechembl.org/search/
ADME SARfari||https://www.ebi.ac.uk/chembl/admesarfari
RDF Platform||https://www.ebi.ac.uk/rdf/
UniChem||https://www.ebi.ac.uk/unichem/
Removed:
search tool||https://www.ebi.ac.uk/chembldb/
web-services||https://www.ebi.ac.uk/chembl/ws
'dataProcesses' has been modified:
Before:
quarterly release
manual curation
access to historical files available
web interface
file download (text,XLS,SDF exports)
SQL database dump
web-services (XML, JSON)
After:
quarterly release
manual curation
access to historical files available
web services
file download (text,XLS,SDF exports)
SQL database dump
web-services (XML, JSON)
search
Added:
web services
search
Removed:
web interface
Edits to 'https://fairsharing.org/FAIRsharing.m3jtpg' by 'The FAIRsharing Team' at 18:46, 11 Jul 2018 (approved):
'name' has been modified:
Before: ChEMBL: a large-scale bioactivity database for drug discovery
After: ChEMBL