databases > DOI:10.25504/FAIRsharing.tw7vf

ready Human Disease-Related Viral Integration Sites

Abbreviation:Dr.VIS

General Information
Dr.VIS collects and locates human disease-related viral integration sites. So far, about 600 sites covering 5 virus organisms and 11 human diseases are available. Integration sites in Dr.VIS are located against chromesome, cytoband, gene and refseq position as specific as possible. Viral-cellular junction sequences are extracted from papers and nucleotide databases, and linked to cooresponding integration sites Graphic views summarizing distribution of viral integration sites are generated according to chromosome maps.

Homepage http://www.bioinfo.org/drvis/index.php

Developed in China

Created in 2011





How to cite this record FAIRsharing.org: Dr.VIS; Human Disease-Related Viral Integration Sites; DOI: https://doi.org/10.25504/FAIRsharing.tw7vf; Last edited: Jan. 8, 2019, 1:13 p.m.; Last accessed: Feb 23 2019 6:32 p.m.


Record updated: Nov. 21, 2018, 10:47 a.m. by The FAIRsharing Team.

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Support

General

help http://www.bioinfo.org/drvis/help.php

Additional Information

Contact Haitao Zhao

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Versioning

versioning by date No link recorded

Data Release

monthly release No link recorded

Data Curation

manual curation No link recorded

Data Access

browse http://www.bioinfo.org/drvis/browser.php
file download http://www.bioinfo.org/drvis/download.php
SQL database dump No link recorded



Publications

Dr.VIS v2.0: an updated database of human disease-related viral integration sites in the era of high-throughput deep sequencing.

Yang X,Li M,Liu Q,Zhang Y,Qian J,Wan X,Wang A,Zhang H,Zhu C,Lu X,Mao Y,Sang X,Zhao H,Zhao Y,Zhang X
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

Dr.VIS: a database of human disease-related viral integration sites.

Zhao X,Liu Q,Cai Q,Li Y,Xu C,Li Y,Li Z,Zhang X
Nucleic Acids Res 2011

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

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Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined


Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

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Funds

Grant Number(s)

  • 12ZR1421500 (Natural Science Foundation of Shanghai, China)

  • 2008BAI64B01 (National Key Technology R&D Program, Ministry of Science and Technology of the People's Republic of China, Beijing, China)

  • 2009AA02Z308 (The 863 Hi-Tech Program of China)

  • 2010CB529200 (National Basic Research Program of China, Beijing, China)

  • 2010CB945501 (National Basic Research Program of China, Beijing, China)

  • 2010DFB33720 (International Science and Technology Cooperation Projects)

  • 20114182 (Shanghai Municipal Health Bureau Scientific Research Task)

  • 2014-2-4012 (China National Health Development Research Center (NHDRC), Beijing, China)

  • 30970623 (National Natural Science Foundation of China (NSFC), Beijing, China)

  • 81101955 (National Natural Science Foundation of China (NSFC), Beijing, China)

  • 91229120 (National Natural Science Foundation of China (NSFC), Beijing, China)

  • NCET-11-0288 (Program for New Century Excellent Talents in University of China)