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ready Fungal and Oomycete genomics resource

Abbreviation:FungiDB

General Information
FungiDB is an integrated genomic and functional genomic database for the kingdom Fungi. The database integrates whole genome sequence and annotation and also includes experimental and environmental isolate sequence data. The database includes comparative genomics, analysis of gene expression, and supplemental bioinformatics analyses and a web interface for data-mining.



Record updated: Sept. 2, 2016, 1:56 p.m. by The FAIRsharing Team.




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Conditions of Use


Data Access


REST Web Services



Connectivity
Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts




Credit

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Funds

Maintains

Grant Number(s)

  • 2011-68004-30104 (USAD, National Institute of Food and Agriculture, USA)

  • R03 AI105636-02 (National Institutes of Health)


Publications

FungiDB: an integrated functional genomics database for fungi.

Stajich JE,Harris T,Brunk BP,Brestelli J,Fischer S,Harb OS,Kissinger JC,Li W,Nayak V,Pinney DF,Stoeckert CJ Jr,Roos DS
Nucleic Acids Res 2011

View Paper (PubMed) View Paper (DOI)

Literature-based gene curation and proposed genetic nomenclature for cryptococcus.

Inglis DO,Skrzypek MS,Liaw E,Moktali V,Sherlock G,Stajich JE
Eukaryot Cell 2014

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Database whiplash, crowdsourcing, and FungiDB.

Momany M
Fungal Genet Biol 2016

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