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deprecated Mechanism, Annotation and Classification in Enzymes

Abbreviation:MACiE

General Information
This record was deprecated on April 10, 2018 for the following reason(s): This resource is now obsolete and, together with CSA (https://fairsharing.org/FAIRsharing.2ajtcf), has formed the basis of the M-CSA resource.

MACiE is an electronic database of well-characterised enzymatic reactions. MACiE is the result of more than three years' collaboration between the Mitchell and Murray-Rust groups in the Unilever Centre and Prof. Janet Thornton at the European Bioinformatics Institute. The database contains the reaction mechanisms for 100 individual enzymes; this includes the overall reactions and the multiple steps that constitute them.


This record is replaced by:

Homepage http://www.ebi.ac.uk/thornton-srv/databases/MACiE

Developed in European Union

Created in 2005

Taxonomic range






How to cite this record FAIRsharing.org: MACiE; Mechanism, Annotation and Classification in Enzymes; DOI: 10.25504/FAIRsharing.7xkx69; Last edited: April 10, 2018, 10:18 a.m.; Last accessed: Jul 16 2018 11:52 a.m.


Record updated: April 10, 2018, 10:18 a.m. by The FAIRsharing Team.


Support

General

FAQ http://www.ebi.ac.uk/thornton-srv/databa ...
online documentation http://www.ebi.ac.uk/thornton-srv/databa ...

Additional Information

Contact Gemma L. Holliday
Identifiers.org MIR:00000077

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Versioning

versioning by release No link recorded
access to historical files available upon request. No link recorded

Data Release

annual release No link recorded

Data Curation

manual curation No link recorded

Data Access

search http://www.ebi.ac.uk/thornton-srv/databases/MACiE/queryMACiE.html
file download(images) No link recorded
MySQL dump on request No link recorded
browse http://www.ebi.ac.uk/thornton-srv/databases/cgi-bin/MACiE/listBy.pl?by ...



Publications

MACiE: a database of enzyme reaction mechanisms.

Holliday GL., Bartlett GJ., Almonacid DE., O'Boyle NM., Murray-Rust P., Thornton JM., Mitchell JB.,
Bioinformatics 2005

View Paper (PubMed) View Paper (DOI)

MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms.

Holliday GL., Almonacid DE., Bartlett GJ., O'Boyle NM., Torrance JW., Murray-Rust P., Mitchell JB., Thornton JM.,
Nucleic Acids Res. 2007

View Paper (PubMed) View Paper (DOI)

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Grant Number(s)

  • BB/C51320X/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)