databases > DOI:10.25504/FAIRsharing.ekzmjp
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ready modMine

General Information
modMine is an integrated web resource of data and tools to browse and search modENCODE data and experimental details, download results and access the GBrowse genome browser.




How to cite this record FAIRsharing.org: modMine; modMine; DOI: https://doi.org/10.25504/FAIRsharing.ekzmjp; Last edited: June 22, 2021, 11:56 a.m.; Last accessed: Sep 18 2021 3:03 p.m.

Publication for citation  modMine: flexible access to modENCODE data Contrino S, Smith RN, Butano D, Carr A, Hu F, Lyne R, Rutherford K, Kalderimis A, Sullivan J, Carbon S, Kephart ET, Lloyd P, Stinson EO, Washington NL, Perry MD, Ruzanov P, Zha Z, Lewis SE, Stein LD, Micklem G.; Nucleic Acids Res. ; 2012; 10.1093/nar/gkr921;


This record is maintained by sergio  and InterMineTeam

Record updated: June 15, 2021, 1:34 p.m. by The FAIRsharing Team.

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Support

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Additional Information

TeSS training resources 

InterMine user tutorial

InterMine user manual




Access / Retrieve Data

Conditions of Use

Applies to: Database software

Data Versioning

Data Release

Data Curation

Data Access


REST Web Services



Publications

Unlocking the secrets of the genome.

Celniker SE., Dillon LA., Gerstein MB., Gunsalus KC., Henikoff S., Karpen GH., Kellis M., Lai EC., Lieb JD., MacAlpine DM., Micklem G., Piano F., Snyder M., Stein L., White KP., Waterston RH.,
Nature 2009

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Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.

Gerstein MB., et al.
Science 2010

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Identification of functional elements and regulatory circuits by Drosophila modENCODE.

Roy S., et al.
Science 2010

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modMine: flexible access to modENCODE data

Contrino S, Smith RN, Butano D, Carr A, Hu F, Lyne R, Rutherford K, Kalderimis A, Sullivan J, Carbon S, Kephart ET, Lloyd P, Stinson EO, Washington NL, Perry MD, Ruzanov P, Zha Z, Lewis SE, Stein LD, Micklem G.
Nucleic Acids Res. 2012

View Paper (PubMed) View Publication