Databases > DOI:10.25504/FAIRsharing.hsbpq3
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ready Simple Modular Architecture Research Tool

Abbreviation:SMART

General Information
SMART (Simple Modular Architecture Research Tool) is a web resource providing simple identification and extensive annotation of protein domains and the exploration of protein domain architectures. It allows the identification and annotation of genetically mobile domains and the analysis of domain architectures. More than 500 domain families found in signalling, extracellular and chromatin-associated proteins are detectable. These domains are extensively annotated with respect to phyletic distributions, functional class, tertiary structures and functionally important residues. Each domain found in a non-redundant protein database as well as search parameters and taxonomic information are stored in a relational database system. User interfaces to this database allow searches for proteins containing specific combinations of domains in defined taxa. For all the details, please refer to the publications on SMART.

Homepage http://smart.embl.de

Developed in Germany

Created in 1998

Taxonomic range






How to cite this record FAIRsharing.org: SMART; Simple Modular Architecture Research Tool; DOI: 10.25504/FAIRsharing.hsbpq3; Last edited: April 10, 2018, 11:01 a.m.; Last accessed: Jul 19 2018 2:35 p.m.


Record updated: April 10, 2018, 10:40 a.m. by The FAIRsharing Team.


Support

General

FAQ SMART FAQ
contact form Contact Form
help Glossary
online documentation About SMART
online documentation What's New

Additional Information

Contact SMART Helpdesk
Identifiers.org MIR:00000118

Tools
Batch Access Script (Perl) http://smart.embl.de/smart/batch.pl

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access

GENOMIC search mode http://smart.embl.de/smart/set_mode.cgi?GENOMIC=1
NORMAL search mode http://smart.embl.de/smart/set_mode.cgi?NORMAL=1



Publications

SMART 6: recent updates and new developments.

Letunic I., Doerks T., Bork P.,
Nucleic Acids Res. 2009

View Paper (PubMed)

SMART 5: domains in the context of genomes and networks.

Letunic I., Copley RR., Pils B., Pinkert S., Schultz J., Bork P.,
Nucleic Acids Res. 2006

View Paper (PubMed)

SMART 4.0: towards genomic data integration.

Letunic I., Copley RR., Schmidt S., Ciccarelli FD., Doerks T., Schultz J., Ponting CP., Bork P.,
Nucleic Acids Res. 2004

View Paper (PubMed)

Recent improvements to the SMART domain-based sequence annotation resource.

Letunic I., Goodstadt L., Dickens NJ., Doerks T., Schultz J., Mott R., Ciccarelli F., Copley RR., Ponting CP., Bork P.,
Nucleic Acids Res. 2002

View Paper (PubMed)

SMART: a web-based tool for the study of genetically mobile domains.

Schultz J., Copley RR., Doerks T., Ponting CP., Bork P.,
Nucleic Acids Res. 2000

View Paper (PubMed)

Protein families in multicellular organisms.

Copley RR., Schultz J., Ponting CP., Bork P.,
Curr. Opin. Struct. Biol. 1999

View Paper (PubMed)

SMART: identification and annotation of domains from signalling and extracellular protein sequences.

Ponting CP., Schultz J., Milpetz F., Bork P.,
Nucleic Acids Res. 1999

View Paper (PubMed)

20 years of the SMART protein domain annotation resource.

Letunic I,Bork P
Nucleic Acids Res 2017

View Paper (PubMed) View Paper (DOI)

SMART: recent updates, new developments and status in 2015.

Letunic I,Doerks T,Bork P
Nucleic Acids Res 2014

View Paper (PubMed) View Paper (DOI)

SMART 7: recent updates to the protein domain annotation resource.

Letunic I,Doerks T,Bork P
Nucleic Acids Res 2011

View Paper (PubMed) View Paper (DOI)

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