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ready Statistical Torsional Angles Potentials of NMR Refinement Database

Abbreviation:STAP

General Information
The STAP database contains refined versions of the NMR structures deposited in PDB. These refinements have been performed using statistical torsion angle potential and structurally- or experimentally- derived distance potential. The refined structures have a significantly improved structural quality compared to their initial NMR structure.



Record updated: Sept. 26, 2016, 11:45 a.m. by The FAIRsharing Team.



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Grant Number(s)

  • 20110002321 (Ministry of Science, ICT and Future Planning, Gwacheon, Korea)

  • 20110019747 (Ministry of Science, ICT and Future Planning, Gwacheon, Korea)


Publications

STAP Refinement of the NMR database: a database of 2405 refined solution NMR structures.

Yang JS,Kim JH,Oh S,Han G,Lee S,Lee J
Nucleic Acids Res 2011

View Paper (PubMed) View Paper (DOI)

Statistical torsion angle potential energy functions for protein structure modeling: a bicubic interpolation approach.

Kim TR,Yang JS,Shin S,Lee J
Proteins 2013

View Paper (PubMed) View Paper (DOI)

Protein NMR structures refined without NOE data.

Ryu H,Kim TR,Ahn S,Ji S,Lee J
PLoS One 2014

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NMRe: a web server for NMR protein structure refinement with high-quality structure validation scores.

Ryu H,Lim G,Sung BH,Lee J
Bioinformatics 2015

View Paper (PubMed) View Paper (DOI)