Virus Pathogen Database and Analysis Resource
Abbreviation:ViPR
Homepage http://www.viprbrc.org
Countries that developed this resource United States
Created in 2010
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: ViPR; Virus Pathogen Database and Analysis Resource; DOI: https://doi.org/10.25504/FAIRsharing.2qx8n8; Last edited: March 27, 2020, 11:08 p.m.; Last accessed: Jun 07 2020 10:08 a.m.
Record updated: March 27, 2020, 11:01 p.m. by The FAIRsharing Team.
| FAQ | https://www.viprbrc.org/brc/staticConten ... |
| contact form | http://www.viprbrc.org/brc/staticContent ... |
| support email | feedback@virusbrc.org |
| help | https://www.viprbrc.org/brcDocs/ViPRHelp ... |
| online documentation | http://www.viprbrc.org/brc/viprTutorials ... |
Additional Information
| Contact | Richard Scheuermann ORCID |
| Metadata-driven Comparative Analysis Tool for Sequences (meta-CATS) | http://www.viprbrc.org/brc/mgc.spg?method=ShowCleanInputPage& |
| Multiple sequence alignment calculation and visualization | http://www.viprbrc.org/brc/msa.spg?method=ShowCleanInputPage& |
| Phylogenetic tree calculation and visualization | http://www.viprbrc.org/brc/tree.spg?method=ShowCleanInputPage& |
| BLAST | http://www.viprbrc.org/brc/blast.spg?method=ShowCleanInputPage& |
| calculation of sequence variation | http://www.viprbrc.org/brc/snpAnalysis.spg?method=ShowCleanInputPage&d ... |
| identify short peptides in proteins | http://www.viprbrc.org/brc/sssearch.spg?method=ShowCleanInputPage&deco ... |
| genome annotator tool | http://www.viprbrc.org/brc/gatuStart.spg?decorator=bunya |
Conditions of Use
Data Versioning
| Outdated records from public resources, as well as derived data, are replaced with the most current information. | No link recorded |
Data Release
| daily | No link recorded |
Data Curation
| manual curation | No link recorded |
| automated curation | No link recorded |
Data Access
| web interface | No link recorded |
| file download(CSV,images) | No link recorded |
ViPR: an open bioinformatics database and analysis resource for virology research.
Pickett BE., Sadat EL., Zhang Y., Noronha JM., Squires RB., Hunt V., Liu M., Kumar S., Zaremba S., Gu Z., Zhou L., Larson CN., Dietrich J., Klem EB., Scheuermann RH.,
Nucleic Acids Res. 2012
Reporting Guidelines
No guidelines defined
Terminology Artifacts
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
This record is not implemented by any policy.
Record Maintainer
Funds
Bioinformatics Resource Centers, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA (Government body)
National Institute of Allergy and Infectious Diseases (NIAD), Bethesda, MD, USA (Government body)
Maintains
J. Craig Venter Institute (JCVI), La Jolla, CA, USA (Research institute)
Northrop Grumman Health IT (Company)
Vecna Technologies (Company)
Grant Number(s)
HHSN272201400028C (National Institute of Allergy and Infectious Diseases (NIAD), Bethesda, MD, USA)
N01-AI2008038 (Bioinformatics Resource Centers, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA)
