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ready GlycoProtDB


General Information
GlycoProtDB is a glycoprotein database providing information of Asn (N)-glycosylated proteins and their glycosylated site(s), which were constructed by employing a bottom-up strategy using actual glycopeptide sequences identified by LC/MS-based glycoproteomic technologies. The database is searchable using gene ID, gene name, and its description (protein name) as query. Each data sheet of glycproteins is based on a single amino acid sequence in Wormpep database for C.elegans and NCBI Refseq database for mouse. The sheet presents actually detected N-glycosylation site(s) which are displayed each capturing methods of glycopeptide subset, e.g., lectins Concanavalin A, wheat germ agglutinin (WGA), or HILIC (hydrophilic interaction chromatography), as well as potential N-glycosylation sites (NX[STC], X≠P). Protein sequences, which have common glycopeptide sequence(s), are linked each other.

How to cite this record ; DOI: 10.25504/FAIRsharing.bc23s; Last edited: Feb. 22, 2018, 2:46 p.m.; Last accessed: Feb 23 2018 2:43 a.m.

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Record updated: Dec. 7, 2016, 10:21 a.m. by The FAIRsharing Team.


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Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB

Kaji H. et al
Journal of Proteome 2012

View Paper (PubMed) View Paper (DOI)

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