Databases > DOI:10.25504/FAIRsharing.tby3x7

ready Arabidopsis Thaliana Trans-factor and cis-Element prediction Database

Abbreviation:ATTED-II

General Information
ATTED-II is a coexpression database for plant species with parallel views of multiple coexpression data sets and network analysis tools. The user can find functional gene relationships and design experiments to identify gene functions by reverse genetics and general molecular biology techniques.




How to cite this record FAIRsharing.org: ATTED-II; Arabidopsis Thaliana Trans-factor and cis-Element prediction Database; DOI: 10.25504/FAIRsharing.tby3x7; Last edited: Feb. 22, 2018, 2:46 p.m.; Last accessed: Jul 17 2018 12:28 p.m.


Record updated: Nov. 24, 2017, 7:57 p.m. by The FAIRsharing Team.


Support

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use

Applies to: General

Data Access




Publications

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis.

Obayashi T., Kinoshita K., Nakai K., Shibaoka M., Hayashi S., Saeki M., Shibata D., Saito K., Ohta H.,
Nucleic Acids Res. 2007

View Paper (PubMed)

ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression.

Aoki Y,Okamura Y,Tadaka S,Kinoshita K,Obayashi T
Plant Cell Physiol 2015

View Paper (PubMed) View Paper (DOI)

ATTED-II in 2014: evaluation of gene coexpression in agriculturally important plants.

Obayashi T,Okamura Y,Ito S,Tadaka S,Aoki Y,Shirota M,Kinoshita K
Plant Cell Physiol 2013

View Paper (PubMed) View Paper (DOI)

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined


Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

Maintains

Grant Number(s)

  • 11102558 (Japan Science and Technology Agency)

  • 24114005 (Japan Society for the Promotion of Science)