BioModels
Homepage https://www.ebi.ac.uk/biomodels/
Developed in European Union
Created in 2005
Taxonomic range
Knowledge Domains BETA
Subjects BETA
How to cite this record FAIRsharing.org: BioModels; BioModels; DOI: https://doi.org/10.25504/FAIRsharing.paz6mh; Last edited: Jan. 15, 2019, 12:51 p.m.; Last accessed: Feb 16 2019 10:15 p.m.
Publication for citation BioModels: expanding horizons to include more modelling approaches and formats. Glont M,Nguyen TVN,Graesslin M,Halke R,Ali R,Schramm J,Wimalaratne SM,Kothamachu VB,Rodriguez N,Swat MJ,Eils J,Eils R,Laibe C,Malik-Sheriff RS,Chelliah V,Le Novere N,Hermjakob H; Nucleic Acids Res ; 2017; 10.1093/nar/gkx1023;
Record updated: Jan. 15, 2019, 12:50 p.m. by The FAIRsharing Team.
FAQ | BioModels FAQ |
Mailing List | BioModels Mailing List |
Mailing List | None |
online documentation | News |
online documentation | Model space in neurodegeneration - model ... |
training | Courses |
@biomodels |
Additional Information
Contact | BioModels Team |
Identifiers.org | MIR:00000007 |
TeSS training resources
SPARQL Querying | https://www.ebi.ac.uk/rdf/services/sparql |
SBFC Online | https://www.ebi.ac.uk/biomodels/tools/converters/ |
Conditions of Use
Applies to: Data useData Curation
submit | https://www.ebi.ac.uk/biomodels/model/create?execution=e1s1 |
Data Access
search | https://www.ebi.ac.uk/biomodels/search?query=*%3A* |
Download | ftp://ftp.ebi.ac.uk/pub/databases/biomodels/ |
Browse by GO Category | https://www.ebi.ac.uk/biomodels/goChart/index |
Parameter Search | https://www.ebi.ac.uk/biomodels/parameterSearch/index |
REST Web Services
BioModels API | https://www.ebi.ac.uk/biomodels/docs/ |
BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems.
Le Novère N., Bornstein B., Broicher A., Courtot M., Donizelli M., Dharuri H., Li L., Sauro H., Schilstra M., Shapiro B., Snoep JL., Hucka M.,
Nucleic Acids Res. 2006
BioModels: Content, Features, Functionality, and Use.
Juty N, Ali R, Glont M, Keating S, Rodriguez N, Swat MJ, Wimalaratne SM, Hermjakob H, Le Novère N, Laibe C, Chelliah V.
CPT Pharmacometrics Syst Pharmacol. 2015
BioModels: expanding horizons to include more modelling approaches and formats.
Glont M,Nguyen TVN,Graesslin M,Halke R,Ali R,Schramm J,Wimalaratne SM,Kothamachu VB,Rodriguez N,Swat MJ,Eils J,Eils R,Laibe C,Malik-Sheriff RS,Chelliah V,Le Novere N,Hermjakob H
Nucleic Acids Res 2017
Reporting Guidelines
Terminology Artifacts
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
Record Maintainer
This record is maintained by nsjuty
Funds
European Molecular Biology Laboratory (EMBL), Heidelberg, Germany (Research institute)
Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)
Innovative Medicines Initiative (IMI), Europe (Consortium)
Maintains
European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK (Research institute) Lead
BBSRC Babraham Institute, Cambridge, UK (Government body)
SBML Community (Consortium)
Grant Number(s)
Multimod, BB/N019482/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)
TransQST, 116030 (Innovative Medicines Initiative (IMI), Europe)