Gene Ontology Annotation

Abbreviation:GOA

Recommended

General Information

The GOA (Gene Ontology Annotation) project provides high-quality Gene Ontology (GO) annotations to proteins in the UniProt Knowledgebase (UniProtKB) and International Protein Index (IPI). This involves electronic annotation and the integration of high-quality manual GO annotation from all GO Consortium model organism groups and specialist groups.

Homepage http://www.ebi.ac.uk/GOA

Countries that developed this resource European Union

Taxonomic range

All

Knowledge Domains

Subjects

In the following recommendations:

How to cite this record FAIRsharing.org: GOA; Gene Ontology Annotation; DOI: https://doi.org/10.25504/FAIRsharing.7zffgc; Last edited: Jan. 17, 2019, 9:50 a.m.; Last accessed: Sep 17 2019 2:26 p.m.

Publication for citation The GOA database: gene Ontology annotation updates for 2015. Huntley RP,Sawford T,Mutowo-Meullenet P,Shypitsyna A,Bonilla C,Martin MJ,O'Donovan C; Nucleic Acids Res ; 2014; 10.1093/nar/gku1113;

This record is maintained by orchard

Record updated: Jan. 17, 2019, 9:50 a.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.7zffgc' by 'The FAIRsharing Team' at 09:50, 17 Jan 2019 (approved):

	'dataProcesses' has been modified:
		Before:
			Manual and automated curation
			Download (FTP)
			Search Options
			Contributing to GOA
			Download Options
		After:
			Manual and automated curation
			Download (FTP)
			Search Options
			Contributing to GOA
			Download Options
			releases approximately every four weeks
		Added:
			releases approximately every four weeks
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.7zffgc' by 'The FAIRsharing Team' at 09:49, 17 Jan 2019 (approved):

	'organizations' has been modified:
		Before:
			Parkinson's UK|http://www.parkinsons.org.uk|Funds
			Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains
			The British Heart Foundation|https://www.bhf.org.uk|Funds
			National Human Genome Research Institute (NHGRI), Bethesda, MD, USA|http://www.genome.gov/|Funds
			European Molecular Biology Laboratory (EMBL), Heidelberg, Germany|http://www.embl.org|Funds
		After:
			Parkinson's UK|http://www.parkinsons.org.uk|Funds
			The British Heart Foundation|https://www.bhf.org.uk|Funds
			National Human Genome Research Institute (NHGRI), Bethesda, MD, USA|http://www.genome.gov/|Funds
			European Molecular Biology Laboratory (EMBL), Heidelberg, Germany|http://www.embl.org|Funds
			European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK|https://www.ebi.ac.uk/|Maintains
		Added:
			European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK|https://www.ebi.ac.uk/|Maintains
		Removed:
			Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains

	'standardsImplemented' has been modified:
		Before:
			Evidence codes
		After:
			Evidence codes
			Gene Ontology
		Added:
			Gene Ontology
		Removed:

	'publications' has been modified:
		Before:
			The GOA database in 2009--an integrated Gene Ontology Annotation resource.|Barrell D., Dimmer E., Huntley RP., Binns D., O'Donovan C., Apweiler R., |Nucleic Acids Res.|2009
		After:
			The GOA database in 2009--an integrated Gene Ontology Annotation resource.|Barrell D., Dimmer E., Huntley RP., Binns D., O'Donovan C., Apweiler R., |Nucleic Acids Res.|2009
			The GOA database: gene Ontology annotation updates for 2015.|Huntley RP,Sawford T,Mutowo-Meullenet P,Shypitsyna A,Bonilla C,Martin MJ,O'Donovan C|Nucleic Acids Res|2014
		Added:
			The GOA database: gene Ontology annotation updates for 2015.|Huntley RP,Sawford T,Mutowo-Meullenet P,Shypitsyna A,Bonilla C,Martin MJ,O'Donovan C|Nucleic Acids Res|2014
		Removed:

	'dataProcesses' has been modified:
		Before:
			Manual and automated curation
			Download
			search
			submit
		After:
			Manual and automated curation
			Download (FTP)
			Search Options
			Contributing to GOA
			Download Options
		Added:
			Download (FTP)
			Search Options
			Contributing to GOA
			Download Options
		Removed:
			Download
			search
			submit

Support

General

FAQ	GOA FAQ
contact form	Contact GOA
help	GOA User Guide

Additional Information

Contact	General Enquiries
Identifiers.org	MIR:00000196

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0

Data Release

releases approximately every four weeks

No link recorded

Data Curation

Manual and automated curation	No link recorded
Contributing to GOA	http://www.ebi.ac.uk/GOA/contribute

Data Access

Download (FTP)	ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/
Search Options	http://www.ebi.ac.uk/GOA/searching
Download Options	https://www.ebi.ac.uk/GOA/downloads

Publications

The GOA database in 2009--an integrated Gene Ontology Annotation resource.

Barrell D., Dimmer E., Huntley RP., Binns D., O'Donovan C., Apweiler R.,
Nucleic Acids Res. 2009

View Paper (PubMed)

The GOA database: gene Ontology annotation updates for 2015.

Huntley RP,Sawford T,Mutowo-Meullenet P,Shypitsyna A,Bonilla C,Martin MJ,O'Donovan C
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Implementing Policies

Credit

Record Maintainer

This record is maintained by orchard

Funds

Parkinson's UK (Charitable foundation)
The British Heart Foundation (Charitable foundation)
National Human Genome Research Institute (NHGRI), Bethesda, MD, USA (Government body)
European Molecular Biology Laboratory (EMBL), Heidelberg, Germany (Government body)

Maintains

European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK (Research institute) Lead

Grant Number(s)

1U41HG006104-03 (National Human Genome Research Institute (NHGRI), Bethesda, MD, USA)
5P41HG002273-09 (National Human Genome Research Institute (NHGRI), Bethesda, MD, USA)
G-1307 (Parkinson's UK)
RG/13/5/30112 (The British Heart Foundation)

Gene Ontology Annotation

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