ready Eukaryotic Pathogen Database Resources


General Information
EuPathDB is an integrated database covering the eukaryotic pathogens. While each of the taxonomic groups within this resource is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all of these resources, and the opportunity to leverage orthology for searches across genera.

Collected/Recommended By

Record updated: June 29, 2016, 1:17 p.m. by The FAIRsharing Team.

Related Standards

Reporting Guidelines

No guidelines defined


EuPathDB: a portal to eukaryotic pathogen databases.

Aurrecoechea C., Brestelli J., Brunk BP., Fischer S., Gajria B., Gao X., Gingle A., Grant G., Harb OS., Heiges M., Innamorato F., Iodice J., Kissinger JC., Kraemer ET., Li W., Miller JA., Nayak V., Pennington C., Pinney DF., Roos DS., Ross C., Srinivasamoorthy G., Stoeckert CJ., Thibodeau R., Treatman C., Wang H.,
Nucleic Acids Res. 2010

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ApiDB: integrated resources for the apicomplexan bioinformatics resource center.

Aurrecoechea C, Heiges M, Wang H, Wang Z, Fischer S, Rhodes P, Miller J, Kraemer E, Stoeckert CJ Jr, Roos DS, Kissinger JC.
Nucleic Acids Res. 2007

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Standardized metadata for human pathogen/vector genomic sequences.

Dugan VG,Emrich SJ,Giraldo-Calderon GI,Harb OS,Newman RM,Pickett BE,Schriml LM,Stockwell TB,Stoeckert CJ Jr,Sullivan DE,Singh I,Ward DV,Yao A,Zheng J,Barrett T,Birren B,Brinkac L,Bruno VM,Caler E,Chapman S,Collins FH,Cuomo CA,Di Francesco V,Durkin S,Eppinger M,Feldgarden M,Fraser C,Fricke WF,Giovanni M,Henn MR,Hine E,Hotopp JD,Karsch-Mizrachi I,Kissinger JC,Lee EM,Mathur P,Mongodin EF,Murphy CI,Myers G,Neafsey DE,Nelson KE,Nierman WC,Puzak J,Rasko D,Roos DS,Sadzewicz L,Silva JC,Sobral B,Squires RB,Stevens RL,Tallon L,Tettelin H,Wentworth D,White O,Will R,Wortman J,Zhang Y,Scheuermann RH
PLoS One 2014

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The Eukaryotic Pathogen Databases: a functional genomic resource integrating data from human and veterinary parasites.

Harb OS,Roos DS
Methods Mol Biol 2014

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SchistoDB: an updated genome resource for the three key schistosomes of humans.

Zerlotini A,Aguiar ER,Yu F,Xu H,Li Y,Young ND,Gasser RB,Protasio AV,Berriman M,Roos DS,Kissinger JC,Oliveira G
Nucleic Acids Res 2012

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