ImMunoGeneTics Information System

Abbreviation:IMGT

General Information

IMGT is a high-quality integrated knowledge resource specialized in the immunoglobulins (IG) or antibodies, T cell receptors (TR), major histocompatibility complex (MHC) of human and other vertebrate species, and in the immunoglobulin superfamily (IgSF), major histocompatibility complex superfamily (MhcSF) and related proteins of the immune system (RPI) of vertebrates and invertebrates.

Homepage http://www.imgt.org

Developed in France

Created in 1989

Taxonomic range

All

Knowledge Domains BETA

Subjects BETA

How to cite this record FAIRsharing.org: IMGT; ImMunoGeneTics Information System; DOI: https://doi.org/10.25504/FAIRsharing.8d3ka8; Last edited: March 15, 2019, 12:36 p.m.; Last accessed: Mar 25 2019 5:42 p.m.

Record updated: March 15, 2019, 10:15 a.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/FAIRsharing.8d3ka8' by 'The FAIRsharing Team' at 10:15, 15 Mar 2019 (approved):

	'organizations' has been modified:
		Before:
			Ministere de l_Enseignement superieur, de la Recherche et de l_Innovation, Paris, France|http://www.enseignementsup-recherche.gouv.fr|Funds
			University of Montpellier, France|http://www.umontpellier.fr|Funds
			The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr|Funds
			National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
			International ImMunoGeneTics information system (IMGT), Montpellier, France|http://www.imgt.org/|Maintains
			Laboratoire de Microbiologie et Genetique Moleculaires (LMGM), Toulouse, France|https://www-lmgm.biotoul.fr|Maintains
			EU BIOTECH|http://ec.europa.eu/growth/sectors/biotechnology_en|Funds
		After:
			Ministere de l_Enseignement superieur, de la Recherche et de l_Innovation, Paris, France|http://www.enseignementsup-recherche.gouv.fr|Funds
			University of Montpellier, France|http://www.umontpellier.fr|Funds
			The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr|Funds
			EU BIOTECH|http://ec.europa.eu/growth/sectors/biotechnology_en|Funds
			National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
			International ImMunoGeneTics information system (IMGT), Montpellier, France|http://www.imgt.org/|Maintains
			Laboratoire de Microbiologie et Genetique Moleculaires (LMGM), Toulouse, France|https://www-lmgm.biotoul.fr|Maintains
			European Unions 5th PCRDT programme|https://en.wikipedia.org/wiki/Framework_Programmes_for_Research_and_Technological_Development|Funds
			BIOMED1 European Union|https://cordis.europa.eu/project/rcn/26618/fr|Funds
			 EU ImmunoGrid|https://cordis.europa.eu/project/rcn/79503/factsheet/en|Funds
		Added:
			European Unions 5th PCRDT programme|https://en.wikipedia.org/wiki/Framework_Programmes_for_Research_and_Technological_Development|Funds
			BIOMED1 European Union|https://cordis.europa.eu/project/rcn/26618/fr|Funds
			 EU ImmunoGrid|https://cordis.europa.eu/project/rcn/79503/factsheet/en|Funds
		Removed:

	'supportLinks' has been modified:
		Before:
			FAQ|http://www.imgt.org/FAQ/
			help|http://www.imgt.org/download/LIGM-DB/userman_doc.html
		After:
			FAQ|http://www.imgt.org/FAQ/
			help|http://www.imgt.org/download/LIGM-DB/userman_doc.html
			online documentation|http://www.imgt.org/IMGTScientificChart/
			online documentation|http://www.imgt.org/IMGTindex/
			online documentation|http://www.imgt.org/IMGTbloc-notes/
			online documentation|http://www.imgt.org/IMGTposters/
			online documentation|http://www.imgt.org/IMGTmedical/
			online documentation|http://www.imgt.org/IMGTveterinary/
			online documentation|http://www.imgt.org/about/immunoinformatics.php
			online documentation|http://www.imgt.org/IMGTbiotechnology/
			online documentation|http://www.imgt.org/IMGTrepertoire/
			rss|http://www.imgt.org/rss/
			training|http://www.imgt.org/IMGTeducation/
		Added:
			online documentation|http://www.imgt.org/IMGTScientificChart/
			online documentation|http://www.imgt.org/IMGTindex/
			online documentation|http://www.imgt.org/IMGTbloc-notes/
			online documentation|http://www.imgt.org/IMGTposters/
			online documentation|http://www.imgt.org/IMGTmedical/
			online documentation|http://www.imgt.org/IMGTveterinary/
			online documentation|http://www.imgt.org/about/immunoinformatics.php
			online documentation|http://www.imgt.org/IMGTbiotechnology/
			online documentation|http://www.imgt.org/IMGTrepertoire/
			rss|http://www.imgt.org/rss/
			training|http://www.imgt.org/IMGTeducation/
		Removed:

	'dataProcesses' has been modified:
		Before:
			Download
		After:
			Download
			IMGT/PhyloGene
			IMGT/DomainDisplay
			 IMGT/GeneSearch
			 IMGT/GeneInfo
			IMGT/LIGM-DB query
			IMGT/MH-DB query
			IMGT/PRIMER-DB query
			IMGT/CLL-DB query
			IMGT/GENE-DB Query
			IMGT/mAb-DB
			IMGT Other accesses
			Blast
			Sequence submission
		Added:
			IMGT/PhyloGene
			IMGT/DomainDisplay
			 IMGT/GeneSearch
			 IMGT/GeneInfo
			IMGT/LIGM-DB query
			IMGT/MH-DB query
			IMGT/PRIMER-DB query
			IMGT/CLL-DB query
			IMGT/GENE-DB Query
			IMGT/mAb-DB
			IMGT Other accesses
			Blast
			Sequence submission
		Removed:

	'grants' has been modified:
		Before:
			ANR-10-LABX-5301
			BIO4CT96-0037
		After:
			ANR-10-LABX-5301
			BIO4CT96-0037
			BIOCT930038
			BIOSYS06_135457
			IST-028069
			QLG2-2000-01287
		Added:
			BIOCT930038
			BIOSYS06_135457
			IST-028069
			QLG2-2000-01287
		Removed:

	'publications' has been modified:
		Before:
			IMGT, the international ImMunoGeneTics information system.|Lefranc MP., Giudicelli V., Ginestoux C., Jabado-Michaloud J., Folch G., Bellahcene F., Wu Y., Gemrot E., Brochet X., Lane J., Regnier L., Ehrenmann F., Lefranc G., Duroux P., |Nucleic Acids Res.|2009
			IMGT(R), the international ImMunoGeneTics information system(R) 25 years on.|Lefranc MP,Giudicelli V,Duroux P,Jabado-Michaloud J,Folch G,Aouinti S,Carillon E,Duvergey H,Houles A,Paysan-Lafosse T,Hadi-Saljoqi S,Sasorith S,Lefranc G,Kossida S|Nucleic Acids Res|2014
			IMGT, the International ImMunoGeneTics database.|Lefranc MP,Giudicelli V,Busin C,Bodmer J,Muller W,Bontrop R,Lemaitre M,Malik A,Chaume D|Nucleic Acids Res|1998
			IMGT, the international ImMunoGeneTics database.|Ruiz M,Giudicelli V,Ginestoux C,Stoehr P,Robinson J,Bodmer J,Marsh SG,Bontrop R,Lemaitre M,Lefranc G,Chaume D,Lefranc MP|Nucleic Acids Res|1999
			IMGT, the international ImMunoGeneTics database.|Lefranc MP|Nucleic Acids Res|2000
		After:
			IMGT, the international ImMunoGeneTics information system.|Lefranc MP., Giudicelli V., Ginestoux C., Jabado-Michaloud J., Folch G., Bellahcene F., Wu Y., Gemrot E., Brochet X., Lane J., Regnier L., Ehrenmann F., Lefranc G., Duroux P., |Nucleic Acids Res.|2009
			IMGT(R), the international ImMunoGeneTics information system(R) 25 years on.|Lefranc MP,Giudicelli V,Duroux P,Jabado-Michaloud J,Folch G,Aouinti S,Carillon E,Duvergey H,Houles A,Paysan-Lafosse T,Hadi-Saljoqi S,Sasorith S,Lefranc G,Kossida S|Nucleic Acids Res|2014
			IMGT, the International ImMunoGeneTics database.|Lefranc MP,Giudicelli V,Busin C,Bodmer J,Muller W,Bontrop R,Lemaitre M,Malik A,Chaume D|Nucleic Acids Res|1998
			IMGT, the international ImMunoGeneTics database.|Ruiz M,Giudicelli V,Ginestoux C,Stoehr P,Robinson J,Bodmer J,Marsh SG,Bontrop R,Lemaitre M,Lefranc G,Chaume D,Lefranc MP|Nucleic Acids Res|1999
			IMGT, the international ImMunoGeneTics database.|Lefranc MP|Nucleic Acids Res|2000
			IMGT, the international ImMunoGeneTics information system.|Lefranc MP,Giudicelli V,Kaas Q,Duprat E,Jabado-Michaloud J,Scaviner D,Ginestoux C,Clement O,Chaume D,Lefranc G|Nucleic Acids Res|2004
		Added:
			IMGT, the international ImMunoGeneTics information system.|Lefranc MP,Giudicelli V,Kaas Q,Duprat E,Jabado-Michaloud J,Scaviner D,Ginestoux C,Clement O,Chaume D,Lefranc G|Nucleic Acids Res|2004
		Removed:

	'tools' has been modified:
		Before:
		After:
			IMGT/HighV-QUEST|1.6.5|http://www.imgt.org/HighV-QUEST/home.action
			IMGT/StatClonotype |1.0.3|http://www.imgt.org/StatClonotype/
			IMGT/V-QUEST |3.4.17|http://www.imgt.org/IMGT_vquest/vquest
			IMGT/JunctionAnalysis|2.1.9 |http://www.imgt.org/IMGT_jcta/jcta?livret=0
			IMGT/Allele-Align||http://www.imgt.org/Allele-Align/
			IMGT/GeneFrequency|2.0.0 |http://www.imgt.org/genefrequency/query
			IMGT/DomainGapAlign|4.9.2|http://www.imgt.org/3Dstructure-DB/cgi/DomainGapAlign.cgi
			IMGT/Collier-de-Perles|2.0.0|http://www.imgt.org/3Dstructure-DB/cgi/Collier-de-Perles.cgi
			IMGT/DomainSuperimpose||http://www.imgt.org/3Dstructure-DB/cgi/DomainSuperimpose.cgi
			IMGT/StructuralQuery |4.12.2|http://www.imgt.org/3Dstructure-DB/
		Added:
			IMGT/HighV-QUEST|1.6.5|http://www.imgt.org/HighV-QUEST/home.action
			IMGT/StatClonotype |1.0.3|http://www.imgt.org/StatClonotype/
			IMGT/V-QUEST |3.4.17|http://www.imgt.org/IMGT_vquest/vquest
			IMGT/JunctionAnalysis|2.1.9 |http://www.imgt.org/IMGT_jcta/jcta?livret=0
			IMGT/Allele-Align||http://www.imgt.org/Allele-Align/
			IMGT/GeneFrequency|2.0.0 |http://www.imgt.org/genefrequency/query
			IMGT/DomainGapAlign|4.9.2|http://www.imgt.org/3Dstructure-DB/cgi/DomainGapAlign.cgi
			IMGT/Collier-de-Perles|2.0.0|http://www.imgt.org/3Dstructure-DB/cgi/Collier-de-Perles.cgi
			IMGT/DomainSuperimpose||http://www.imgt.org/3Dstructure-DB/cgi/DomainSuperimpose.cgi
			IMGT/StructuralQuery |4.12.2|http://www.imgt.org/3Dstructure-DB/
		Removed:

Edits to 'https://fairsharing.org/FAIRsharing.8d3ka8' by 'The FAIRsharing Team' at 08:34, 15 Mar 2019 (approved):

	'organizations' has been modified:
		Before:
			National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
			International ImMunoGeneTics information system (IMGT), Montpellier, France|http://www.imgt.org/|Maintains
			Laboratoire de Microbiologie et Genetique Moleculaires (LMGM), Toulouse, France|https://www-lmgm.biotoul.fr|Maintains
			Ministere de l_Enseignement superieur, de la Recherche et de l_Innovation, Paris, France|http://www.enseignementsup-recherche.gouv.fr|Funds
			University of Montpellier, France|http://www.umontpellier.fr|Funds
			The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr|Funds
		After:
			Ministere de l_Enseignement superieur, de la Recherche et de l_Innovation, Paris, France|http://www.enseignementsup-recherche.gouv.fr|Funds
			University of Montpellier, France|http://www.umontpellier.fr|Funds
			The French National Research Agency (ANR), France|http://www.agence-nationale-recherche.fr|Funds
			National Centre for Scientific Research (CNRS), Paris, France|http://www.cnrs.fr/index.php|Maintains
			International ImMunoGeneTics information system (IMGT), Montpellier, France|http://www.imgt.org/|Maintains
			Laboratoire de Microbiologie et Genetique Moleculaires (LMGM), Toulouse, France|https://www-lmgm.biotoul.fr|Maintains
			EU BIOTECH|http://ec.europa.eu/growth/sectors/biotechnology_en|Funds
		Added:
			EU BIOTECH|http://ec.europa.eu/growth/sectors/biotechnology_en|Funds
		Removed:

	'onto_disciplines' has been modified:
		Before:
			Genetics
			Life Sciences
		After:
			Genetics
			Immunogenetics
			Immunology
			Life Sciences
		Added:
			Immunogenetics
			Immunology
		Removed:

	'onto_domains' has been modified:
		Before:
			Receptor
			allele
			antigen
			immunoglobulin complex
			protein
			small molecule
		After:
			Major Histocompatibility Complex
			Nucleic acid sequence
			Receptor
			allele
			antigen
			chromosomal region
			genome
			immune system
			immunoglobulin complex
			immunoglobulin complex, circulating
			protein
			small molecule
		Added:
			Major Histocompatibility Complex
			Nucleic acid sequence
			chromosomal region
			genome
			immune system
			immunoglobulin complex, circulating
		Removed:

	'grants' has been modified:
		Before:
			ANR-10-LABX-5301
		After:
			ANR-10-LABX-5301
			BIO4CT96-0037
		Added:
			BIO4CT96-0037
		Removed:

	'miriam_id' has been modified:
		Before: None
		After: 

	'publications' has been modified:
		Before:
			IMGT, the international ImMunoGeneTics information system.|Lefranc MP., Giudicelli V., Ginestoux C., Jabado-Michaloud J., Folch G., Bellahcene F., Wu Y., Gemrot E., Brochet X., Lane J., Regnier L., Ehrenmann F., Lefranc G., Duroux P., |Nucleic Acids Res.|2009
			IMGT(R), the international ImMunoGeneTics information system(R) 25 years on.|Lefranc MP,Giudicelli V,Duroux P,Jabado-Michaloud J,Folch G,Aouinti S,Carillon E,Duvergey H,Houles A,Paysan-Lafosse T,Hadi-Saljoqi S,Sasorith S,Lefranc G,Kossida S|Nucleic Acids Res|2014
		After:
			IMGT, the international ImMunoGeneTics information system.|Lefranc MP., Giudicelli V., Ginestoux C., Jabado-Michaloud J., Folch G., Bellahcene F., Wu Y., Gemrot E., Brochet X., Lane J., Regnier L., Ehrenmann F., Lefranc G., Duroux P., |Nucleic Acids Res.|2009
			IMGT(R), the international ImMunoGeneTics information system(R) 25 years on.|Lefranc MP,Giudicelli V,Duroux P,Jabado-Michaloud J,Folch G,Aouinti S,Carillon E,Duvergey H,Houles A,Paysan-Lafosse T,Hadi-Saljoqi S,Sasorith S,Lefranc G,Kossida S|Nucleic Acids Res|2014
			IMGT, the International ImMunoGeneTics database.|Lefranc MP,Giudicelli V,Busin C,Bodmer J,Muller W,Bontrop R,Lemaitre M,Malik A,Chaume D|Nucleic Acids Res|1998
			IMGT, the international ImMunoGeneTics database.|Ruiz M,Giudicelli V,Ginestoux C,Stoehr P,Robinson J,Bodmer J,Marsh SG,Bontrop R,Lemaitre M,Lefranc G,Chaume D,Lefranc MP|Nucleic Acids Res|1999
			IMGT, the international ImMunoGeneTics database.|Lefranc MP|Nucleic Acids Res|2000
		Added:
			IMGT, the International ImMunoGeneTics database.|Lefranc MP,Giudicelli V,Busin C,Bodmer J,Muller W,Bontrop R,Lemaitre M,Malik A,Chaume D|Nucleic Acids Res|1998
			IMGT, the international ImMunoGeneTics database.|Ruiz M,Giudicelli V,Ginestoux C,Stoehr P,Robinson J,Bodmer J,Marsh SG,Bontrop R,Lemaitre M,Lefranc G,Chaume D,Lefranc MP|Nucleic Acids Res|1999
			IMGT, the international ImMunoGeneTics database.|Lefranc MP|Nucleic Acids Res|2000
		Removed:

	'taxonomies' has been modified:
		Before:
			Homo sapiens
		After:
			All
		Added:
			All
		Removed:
			Homo sapiens

Edits to 'https://fairsharing.org/FAIRsharing.8d3ka8' by 'The FAIRsharing Team' at 09:50, 30 Sep 2016 (approved):

	'contactName' has been modified:
		Before:
			
		After:
			 Marie-Paule Lefranc 
		Added:
		Removed:

Support

General

FAQ	http://www.imgt.org/FAQ/
help	http://www.imgt.org/download/LIGM-DB/use ...
online documentation	IMGT Scientific chart
online documentation	IMGT Index
online documentation	IMGT Bloc-notes
online documentation	IMGT Posters and diaporama
online documentation	IMGT Medical page
online documentation	IMGT Veterinary page
online documentation	IMGT Immunoinformatics page
online documentation	IMGT Biotechnology page
online documentation	IMGT Repertoire (IG and TR)
rss	Latest news
training	IMGT Education

Additional Information

Contact

Marie-Paule Lefranc

Tools

IMGT/HighV-QUEST	http://www.imgt.org/HighV-QUEST/home.action	1.6.5
IMGT/StatClonotype	http://www.imgt.org/StatClonotype/	1.0.3
IMGT/V-QUEST	http://www.imgt.org/IMGT_vquest/vquest	3.4.17
IMGT/JunctionAnalysis	http://www.imgt.org/IMGT_jcta/jcta?livret=0	2.1.9
IMGT/Allele-Align	http://www.imgt.org/Allele-Align/
IMGT/GeneFrequency	http://www.imgt.org/genefrequency/query	2.0.0
IMGT/DomainGapAlign	http://www.imgt.org/3Dstructure-DB/cgi/DomainGapAlign.cgi	4.9.2
IMGT/Collier-de-Perles	http://www.imgt.org/3Dstructure-DB/cgi/Collier-de-Perles.cgi	2.0.0
IMGT/DomainSuperimpose	http://www.imgt.org/3Dstructure-DB/cgi/DomainSuperimpose.cgi
IMGT/StructuralQuery	http://www.imgt.org/3Dstructure-DB/	4.12.2

Access / Retrieve Data

Conditions of Use

Applies to: Data use

Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0
Academic use
IMGT Privacy Policy

Data Curation

Sequence submission

http://www.imgt.org/about/submission.php

Data Access

Download	http://www.imgt.org/about/downloads.php
IMGT/PhyloGene	http://www.imgt.org/IMGTPhylogeny/
IMGT/DomainDisplay	http://www.imgt.org/3Dstructure-DB/cgi/DomainDisplay.cgi
IMGT/GeneSearch	http://www.imgt.org/LocusView/
IMGT/GeneInfo	http://www.imgt.org/GeneInfoServlets/htdocs/
IMGT/LIGM-DB query	http://www.imgt.org/ligmdb/
IMGT/MH-DB query	https://www.ebi.ac.uk/ipd/imgt/hla/
IMGT/PRIMER-DB query	http://www.imgt.org/IMGTPrimerDB/
IMGT/CLL-DB query	http://www.imgt.org/CLLDBInterface/query
IMGT/GENE-DB Query	http://www.imgt.org/genedb/
IMGT/mAb-DB	http://www.imgt.org/mAb-DB/
IMGT Other accesses	http://www.imgt.org/about/otheraccesses.php
Blast	http://www.imgt.org/about/comparesequence.php

Publications

IMGT, the international ImMunoGeneTics information system.

Lefranc MP., Giudicelli V., Ginestoux C., Jabado-Michaloud J., Folch G., Bellahcene F., Wu Y., Gemrot E., Brochet X., Lane J., Regnier L., Ehrenmann F., Lefranc G., Duroux P.,
Nucleic Acids Res. 2009

View Paper (PubMed)

IMGT(R), the international ImMunoGeneTics information system(R) 25 years on.

Lefranc MP,Giudicelli V,Duroux P,Jabado-Michaloud J,Folch G,Aouinti S,Carillon E,Duvergey H,Houles A,Paysan-Lafosse T,Hadi-Saljoqi S,Sasorith S,Lefranc G,Kossida S
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

IMGT, the International ImMunoGeneTics database.

Lefranc MP,Giudicelli V,Busin C,Bodmer J,Muller W,Bontrop R,Lemaitre M,Malik A,Chaume D
Nucleic Acids Res 1998

View Paper (PubMed)

IMGT, the international ImMunoGeneTics database.

Ruiz M,Giudicelli V,Ginestoux C,Stoehr P,Robinson J,Bodmer J,Marsh SG,Bontrop R,Lemaitre M,Lefranc G,Chaume D,Lefranc MP
Nucleic Acids Res 1999

View Paper (PubMed)

IMGT, the international ImMunoGeneTics database.

Lefranc MP
Nucleic Acids Res 2000

View Paper (PubMed)

IMGT, the international ImMunoGeneTics information system.

Lefranc MP,Giudicelli V,Kaas Q,Duprat E,Jabado-Michaloud J,Scaviner D,Ginestoux C,Clement O,Chaume D,Lefranc G
Nucleic Acids Res 2004

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

ImMunoGeneTics Ontology

Models and Formats

FASTA Sequence Format

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

Related Databases

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is in need of a maintainer. If you login, you'll be able to claim this record.

Funds

Ministere de l_Enseignement superieur, de la Recherche et de l_Innovation, Paris, France (Government body)
University of Montpellier, France (University)
The French National Research Agency (ANR), France (Government body)
EU BIOTECH (Government body)
European Union’s 5th PCRDT programme
BIOMED1 European Union
EU ImmunoGrid

Maintains

National Centre for Scientific Research (CNRS), Paris, France (Government body)
International ImMunoGeneTics information system (IMGT), Montpellier, France (Government body)
Laboratoire de Microbiologie et Genetique Moleculaires (LMGM), Toulouse, France (Lab)

Grant Number(s)

ANR-10-LABX-53–01 (The French National Research Agency (ANR), France)
BIO4CT96-0037 (EU BIOTECH)
BIOCT930038 (BIOMED1 European Union)
BIOSYS06_135457 (The French National Research Agency (ANR), France)
IST-028069 ( EU ImmunoGrid)
QLG2-2000-01287 (European Union’s 5th PCRDT programme)

ImMunoGeneTics Information System

We need your help!

Developed by

Contact Us

About FAIRsharing