databases > DOI:10.25504/FAIRsharing.mphj4z

ready Yeast Searching for Transcriptional Regulators and Consensus Tracking

Abbreviation:YEASTRACT

General Information
YEASTRACT (Yeast Search for Transcriptional Regulators And Consensus Tracking) is a curated repository of more than 48333 regulatory associations between transcription factors (TF) and target genes in Saccharomyces cerevisiae, based on more than 1200 bibliographic references.

Homepage http://www.yeastract.com

Countries that developed this resource Portugal

Created in 2005

Subjects 





How to cite this record FAIRsharing.org: YEASTRACT; Yeast Searching for Transcriptional Regulators and Consensus Tracking; DOI: https://doi.org/10.25504/FAIRsharing.mphj4z; Last edited: Jan. 8, 2019, 1:18 p.m.; Last accessed: Feb 27 2020 2:07 a.m.


Record updated: Sept. 9, 2016, 5:20 p.m. by The FAIRsharing Team.

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Tools
Transform an ORF List into a Gene List http://www.yeastract.com/formorftogene.php
IUPAC Code Generation for DNA Sequences http://www.yeastract.com/iupacgeneration.php
Generate Regulation Matrix http://www.yeastract.com/formgenerateregulationmatrix.php

Access / Retrieve Data

Conditions of Use

Applies to: Data use
  • Attribution required
  • Publicly available data

Data Access

Download http://www.yeastract.com/download.php
search http://www.yeastract.com/formfindregulators.php



Publications

YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface.

Abdulrehman D., Monteiro PT., Teixeira MC., Mira NP., Lourenço AB., dos Santos SC., Cabrito TR., Francisco AP., Madeira SC., Aires RS., Oliveira AL., Sá-Correia I., Freitas AT.,
Nucleic Acids Res. 2011

View Paper (PubMed) View Publication

The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae.

Teixeira MC,Monteiro PT,Guerreiro JF,Goncalves JP,Mira NP,dos Santos SC,Cabrito TR,Palma M,Costa C,Francisco AP,Madeira SC,Oliveira AL,Freitas AT,Sa-Correia I
Nucleic Acids Res 2013

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YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae.

Monteiro PT,Mendes ND,Teixeira MC,d'Orey S,Tenreiro S,Mira NP,Pais H,Francisco AP,Carvalho AM,Lourenco AB,Sa-Correia I,Oliveira AL,Freitas AT
Nucleic Acids Res 2007

View Paper (PubMed) View Publication

The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae.

Teixeira MC,Monteiro P,Jain P,Tenreiro S,Fernandes AR,Mira NP,Alenquer M,Freitas AT,Oliveira AL,Sa-Correia I
Nucleic Acids Res 2005

View Paper (PubMed) View Publication

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Grant Number(s)

  • PTDC/BIO/72063/2006 (Fundaeo para a Ciencia e a Tecnologia (FCT), Lisboa, Portugal)

  • PTDC/EIA/67722/2006 (Fundaeo para a Ciencia e a Tecnologia (FCT), Lisboa, Portugal)

  • PTDC/EIA/71587/2006 (Fundaeo para a Ciencia e a Tecnologia (FCT), Lisboa, Portugal)

  • Pest-OE/EQB/LA0023/2011_research line (Fundaeo para a Ciencia e a Tecnologia (FCT), Lisboa, Portugal)