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ready Rat Genome Database

Abbreviation:RGD

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General Information
The Rat Genome Database is the premier site for genetic, genomic, phenotype, and disease data generated from rat research. It provides easy access to corresponding human and mouse data for cross-species comparison and its comprehensive data and innovative software tools make it a valuable resource for researchers worldwide.

Homepage http://rgd.mcw.edu/

Developed in United States

Created in 1999




In the following recommendations:




How to cite this record FAIRsharing.org: RGD; Rat Genome Database; DOI: 10.25504/FAIRsharing.pfg82t; Last edited: Feb. 22, 2018, 2:51 p.m.; Last accessed: Jul 19 2018 2:04 p.m.


This record is maintained by jrsmith

Record updated: July 7, 2017, 5:30 p.m. by jrsmith.


In Collections
Data Citation Implementation
Open Science Prize
NIH-supported data repositories

Support

General

contact form http://rgd.mcw.edu/contact/index.shtml
forum Rat Community Forum
help http://rgd.mcw.edu/wg/help3

Additional Information

Contact Jennifer R Smith
Identifiers.org MIR:00000047


Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Access

Download ftp://ftp.rgd.mcw.edu/pub/

REST Web Services

The RGD REST API provides targeted programmatic access to the data, annotations, and analysis tools available at the Rat Genome Database. http://rest.rgd.mcw.edu/rgdws/swagger-ui.html


Publications

The Rat Genome Database, update 2007--easing the path from disease to data and back again.

Twigger SN., Shimoyama M., Bromberg S., Kwitek AE., Jacob HJ.,
Nucleic Acids Res. 2007

View Paper (PubMed)

The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database.

Hayman GT,Laulederkind SJ,Smith JR,Wang SJ,Petri V,Nigam R,Tutaj M,De Pons J,Dwinell MR,Shimoyama M
Database (Oxford) 2016

View Paper (PubMed) View Paper (DOI)

A high-density integrated genetic linkage and radiation hybrid map of the laboratory rat.

Steen RG,Kwitek-Black AE,Glenn C,Gullings-Handley J,Van Etten W,Atkinson OS,Appel D,Twigger S,Muir M,Mull T,Granados M,Kissebah M,Russo K,Crane R,Popp M,Peden M,Matise T,Brown DM,Lu J,Kingsmore S,Tonellato PJ,Rozen S,Slonim D,Young P,Jacob HJ
Genome Res 1999

View Paper (PubMed)

The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease.

Shimoyama M,De Pons J,Hayman GT,Laulederkind SJ,Liu W,Nigam R,Petri V,Smith JR,Tutaj M,Wang SJ,Worthey E,Dwinell M,Jacob H
Nucleic Acids Res 2014

View Paper (PubMed) View Paper (DOI)




Credit

Record Maintainer

  • This record is maintained by jrsmith

Funds

Maintains

Grant Number(s)

  • HL64541 (National Heart Lung and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA)