Gene Expression Omnibus
Abbreviation:GEO
Homepage http://www.ncbi.nlm.nih.gov/geo/
Countries that developed this resource United States
Created in 2002
Taxonomic range
Knowledge Domains
Subjects
In the following recommendations:
How to cite this record FAIRsharing.org: GEO; Gene Expression Omnibus; DOI: https://doi.org/10.25504/FAIRsharing.5hc8vt; Last edited: Jan. 8, 2019, 1:18 p.m.; Last accessed: Sep 18 2019 12:20 a.m.
Record updated: April 22, 2016, 11:48 a.m. by The FAIRsharing Team.
| FAQ | http://www.ncbi.nlm.nih.gov/geo/info/faq ... |
| help | http://www.ncbi.nlm.nih.gov/geo/series/ |
| online documentation | http://www.ncbi.nlm.nih.gov/geo/info/ |
Additional Information
| Contact | geo@ncbi.nlm.nih.gov |
| Identifiers.org | MIR:00000054 |
| Search | http://www.ncbi.nlm.nih.gov/gds/advanced/ |
| GEO2R | http://www.ncbi.nlm.nih.gov/geo/info/geo2r.html |
| Browse | http://www.ncbi.nlm.nih.gov/sites/GDSbrowser/ |
| GEO Blast | http://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastn&BLAST_SPEC=GeoB ... |
| Entrez Programming Utilities (e-Utils) | http://www.ncbi.nlm.nih.gov/geo/info/geo_paccess.html |
Conditions of Use
Applies to: Data use- Attribution required
- Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0
Data Curation
| Submission web interface | http://www.ncbi.nlm.nih.gov/geo/info/submission.html |
Data Access
| Download | ftp://ftp.ncbi.nlm.nih.gov/geo/ |
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository.
Edgar R., Domrachev M., Lash AE.,
Nucleic Acids Res. 2002
NCBI GEO: archive for functional genomics data sets--update.
Barrett T,Wilhite SE,Ledoux P,Evangelista C,Kim IF,Tomashevsky M,Marshall KA,Phillippy KH,Sherman PM,Holko M,Yefanov A,Lee H,Zhang N,Robertson CL,Serova N,Davis S,Soboleva A
Nucleic Acids Res 2012
Reporting Guidelines
Terminology Artifacts
No semantic standards defined
Models and Formats
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
- Nematode.net
- Bgee DataBase for Gene Expression Evolution
- Stanford Microarray Database
- Immunology Database and Analysis Portal
- NCBI BioSample
- ENCODE Project
- Gemma
- ProteomicsDB
- Datasets2Tools
- Extracellular RNA Atlas
- Sex-Associated Gene Database
- RatMine
- 4DNucleome Data Portal
- DNA Methylation Interactive Visualization Database
- BIOchemical PathwaY DataBase
- Cell Press - Current Biology - Information for Authors
- Cell Press - Neuron - Information for Authors
- Springer Nature - Nature Cell Biology - Availability of Data and materials
- Rockefeller University Press - Journal Of Experimental Medicine - Data Deposition
- Springer Nature - Nature Structural & Molecular Biology - Availability of Data and materials
- Cell Press - Cell Metabolism - Information for Authors
- African Academy of Sciences Open Research Data Guidelines for Authors
- MNI Open Research
- Wellcome Open Research Data Guidelines
- The Plant Cell - Instructions for Authors
- Cell Press - Cell Stem Cell - Information for Authors
- Springer Nature - Nature Chemical Biology - Availability of Data and materials
- Springer Nature Research Data Policy Type 1
- Springer Nature Research Data Policy Type 3 (for life sciences)
- Cold Spring Harbor Lab Press - Genome Research
- Springer Nature - Nature Materials - Availability of Data and materials
- Springer Nature - Nature Biotechnology - Availability of Data and materials
- Rockefeller University Press - Journal Of Cell Biology - Data Deposition
- Elsevier - Lancet Infectious Diseases - Information for Authors
- Elsevier - Lancet Oncology - Information for Authors
- European Molecular Biology Organisation Press Recommended Databases and Data Standards
- F1000Research Data Policy
- GigaScience - Minimum Standards of Reporting Checklist
- Hindawi Research Data Policy
- Springer Nature - Research Data Policies
- Lippincott Williams & Wilkins - Circulation - Research Guidelines
- Lippincott Williams & Wilkins - Circulation Research - Research Guidelines
- HRB Open Research
- National Academy of Sciences - Proceedings of the National Academy of Sciences - Editorial Policies
- eLife Recommended Repositories and Standards
- Springer Nature - Nature - Availability of Data and materials
- Scientific Data Data Policy
- Public Library of Science Recommended Data Repositories
- Springer Nature - Nature Photonics - Availability of Data and materials
- UCL Child Open Health Research
- Springer Nature - Nature Methods - Availability of Data and Materials
- Cell Press - Trends In Plant Science - Information for Authors
- Cell Press - Immunity - Information for Authors
- Cell Press - Molecular Cell - Information for Authors
- Oxford University Press - Journal Of The National Cancer Institute - Manuscript Preparation
- Elsevier - Lancet Neurology - Information for Authors
- American Association for the Advancement of Science - Science - Editorial Policies; Data Materials Availability
- Cell Press - Cell Host & Microbe - Information for Authors
- Elsevier Data Policy
- Springer Nature - Nature Immunology - Availability of Data and materials
- Cell Press - Trends In Biochemical Sciences - Instructions for Authors
- Elsevier - Current Opinion in Cell Biology - Guide for Authors
- Elsevier - The Lancet - Information for Authors
- Springer Nature - Nature Chemistry - Availability of Data and materials
- Springer Nature - Nature Medicine - Availability of Data and materials
- Springer Nature - Nature Nanotechology - Availability of Data and materials
- Springer Nature Research Data Policy Type 2 (for life sciences)
- Springer Nature Research Data Policy Type 4
- Gates Open Research Data Guidelines
- Genetics & Genomics Next
- Springer Nature Research Data Policy Type 2
- Springer Nature Research Data Policy Type 3
- Cell Press - Developmental Cell - Information for Authors
- American Society of Clinical Oncology - Journal of Clinical Oncology - Manuscript Guidelines
- American Society of Hematology - Blood - Manuscript Preparation
- BioMed Central - Minimum Standards of Reporting Checklist
- Cell Press - Cancer Cell - Information for Authors
- Cell Press - Cell - Information for Authors
Record Maintainer
This record is maintained by barrett
Funds
National Institutes of Health (NIH), Bethesda, MD, USA (Government body)
Maintains
National Center for Biotechnology Information (NCBI), Rockville, MD, USA (Research institute)
