databases > DOI:10.25504/FAIRsharing.zcn4w4
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General Information
TreeBASE is a repository of phylogenetic information, specifically user-submitted phylogenetic trees and the data used to generate them. TreeBASE accepts all types of phylogenetic data (e.g., trees of species, trees of populations, trees of genes) representing all biotic taxa.

Homepage http://www.treebase.org/

Countries that developed this resource United States

Created in 1994

Taxonomic range



In the following recommendations:




How to cite this record FAIRsharing.org: TreeBase; TreeBase; DOI: https://doi.org/10.25504/FAIRsharing.zcn4w4; Last edited: Dec. 19, 2019, 10:56 a.m.; Last accessed: Jun 05 2020 11:31 a.m.


Record updated: Dec. 18, 2019, 6:56 p.m. by The FAIRsharing Team.

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Data Citation Implementation

Support

General

support email help@treebase.org
forum Issues
online documentation Wikipedia
online documentation TreeBASE v2: A Database of Phylogenetic Knowledge TreeBASE v2: A Database of Phylogenetic ...
online documentation http://treebase.org/treebase-web/technol ...
online documentation TreeBASE: A database of phylogenetic inf ...
training http://treebase.org/treebase-web/submitT ...
twitter @treebase

Additional Information

Contact William Piel   ORCID

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use

Applies to: Data use
  • Publicly available data

Data Curation

submit https://treebase.org/treebase-web/login.jsp

Data Access

search http://treebase.org/treebase-web/search/studySearch.html

REST Web Services

PhyloWS RESTful API http://evoinfo.nescent.org/PhyloWS


Publications

Improved data retrieval from TreeBASE via taxonomic and linguistic data enrichment.

Anwar N., Hunt E.,
BMC Evol. Biol. 2009

View Paper (PubMed) View Publication

Related Standards

Terminology Artifacts

Models and Formats

Identifier Schemas

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Metrics

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Related Databases

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Credit

Record Maintainer

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Funds

Maintains

Grant Number(s)

  • NSF EF 0331654 (Cyberinfrastructure for Phylogenetic Research)