Xenopus laevis and tropicalis biology and genomics resource
Abbreviation:Xenbase
Homepage http://www.xenbase.org
Countries that developed this resource Canada , United States
Created in 2007
Taxonomic range
Knowledge Domains
Subjects
In the following recommendations:
How to cite this record FAIRsharing.org: Xenbase; Xenopus laevis and tropicalis biology and genomics resource; DOI: https://doi.org/10.25504/FAIRsharing.jrv6wj; Last edited: April 17, 2019, 8:15 p.m.; Last accessed: Jan 27 2021 9:54 p.m.
Record updated: April 17, 2019, 7:45 p.m. by xenbase.
forum | http://forums.xenbase.org |
online documentation | http://wiki.xenbase.org/xenwiki |
@Xenbase |
Additional Information
Contact | Aaron Zorn ORCID |
Conditions of Use
Applies to: General- No reuse without permision
Data Access
Download | ftp://ftp.xenbase.org/pub |
Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes
•JB Karpinka, JD Fortriede, KA Burns, C James-Zorn; VG Ponferrada; J Lee; K Karimi; AM Zorn; PD Vize
Nucleic Acids Res. 2014
The Virtual Xenbase: transitioning an online bioinformatics resource to a private cloud
K Karimi and PD Vize
Database 2014
Xenbase: gene expression and improved integration.
Bowes JB,Snyder KA,Segerdell E,Jarabek CJ,Azam K,Zorn AM,Vize PD
Nucleic Acids Res 2009
Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase.
Segerdell E,Ponferrada VG,James-Zorn C,Burns KA,Fortriede JD,Dahdul WM,Vize PD,Zorn AM
J Biomed Semantics 2013
Xenopus genomic data and browser resources.
Vize PD,Zorn AM
Dev Biol 2016
Navigating Xenbase: An Integrated Xenopus Genomics and Gene Expression Database.
James-Zorn C, Ponferrada V, Fisher ME, Burns K, Fortriede J, Segerdell E, Karimi K, Lotay V, Wang DZ, Chu S, Pells T, Wang Y, Vize PD, Zorn A.
Methods Mol Biol. 2018;1757:251-305. 2018
Xenbase: Facilitating the Use of Xenopus to Model Human Disease.
Nenni MJ, Fisher ME, James-Zorn C, Pells TJ, Ponferrada V, Chu S, Fortriede JD, Burns KA, Wang Y, Lotay VS, Wang DZ, Segerdell E, Chaturvedi P, Karimi K, Vize PD, Zorn AM.
Front Physiol. 2019 Feb 26;10:154 2019
Xenopus genomic data and browser resources.
Vize PD, Zorn AM.
Dev Biol. 2017 Jun 15;426(2):194-199. 2017
Reporting Guidelines
No guidelines defined
Terminology Artifacts
Models and Formats
Identifier Schemas
Metrics
No metrics standards defined
Record Maintainer
This record is maintained by xenbase
Funds
U.S. National Library of Medicine (Government body)
The Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD), National Institutes of Health (NIH), Rockville, MD, USA (Government body)
Maintains
Cincinnati Children's Hospital Medical Center, OH, USA (Government body)
University of Calgary, Canada (University) Lead
Grant Number(s)
P41 HD064556 (The Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD), National Institutes of Health (NIH), Rockville, MD, USA)