Record updated: March 14, 2019, 10:05 p.m. by The FAIRsharing Team.

Edits to 'https://fairsharing.org/FAIRsharing.dxj07r' by 'The FAIRsharing Team' at 22:05, 14 Mar 2019 (approved):

	'contactEmail' has been modified:
		Before: metagenomics-help@ebi.ac.uk
		After: rdf@ebi.ac.uk

	'contact' has been modified:
		Before: General Contact
		After: Robert D Finn

	'supportLinks' has been modified:
		Before:
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour
			contact form|http://www.ebi.ac.uk/support/metagenomics
			help|https://www.ebi.ac.uk/metagenomics/help
			online documentation|https://www.ebi.ac.uk/metagenomics/about
			online documentation|https://emg-docs.readthedocs.io/en/latest/
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-analysing-and-exploring-metagenomics-data
			twitter|@MGnifyDB
		After:
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour
			contact form|http://www.ebi.ac.uk/support/metagenomics
			email|metagenomics-help@ebi.ac.uk
			help|https://www.ebi.ac.uk/metagenomics/help
			online documentation|https://www.ebi.ac.uk/metagenomics/about
			online documentation|https://emg-docs.readthedocs.io/en/latest/
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-analysing-and-exploring-metagenomics-data
			twitter|@MGnifyDB
		Added:
			email|metagenomics-help@ebi.ac.uk
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.dxj07r' by 'The FAIRsharing Team' at 22:02, 14 Mar 2019 (approved):

	'onto_disciplines' has been modified:
		Before:
			Biomedical Science
			Environmental Sciences
			Life Sciences
		After:
			Biodiversity
			Biomedical Science
			Data Submission, Annotation and Curation
			Environmental Sciences
			Life Sciences
			Phylogenomics
			Phylogeny
			Taxonomy
		Added:
			Biodiversity
			Data Submission, Annotation and Curation
			Phylogenomics
			Phylogeny
			Taxonomy
		Removed:

	'supportLinks' has been modified:
		Before:
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour
			contact form|http://www.ebi.ac.uk/support/metagenomics
			online documentation|https://www.ebi.ac.uk/metagenomics/about
			twitter|@MGnifyDB
		After:
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour
			contact form|http://www.ebi.ac.uk/support/metagenomics
			help|https://www.ebi.ac.uk/metagenomics/help
			online documentation|https://www.ebi.ac.uk/metagenomics/about
			online documentation|https://emg-docs.readthedocs.io/en/latest/
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-analysing-and-exploring-metagenomics-data
			twitter|@MGnifyDB
		Added:
			help|https://www.ebi.ac.uk/metagenomics/help
			online documentation|https://emg-docs.readthedocs.io/en/latest/
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-quick-tour
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-portal-submitting-metagenomics-da
			training|https://www.ebi.ac.uk/training/online/course/ebi-metagenomics-analysing-and-exploring-metagenomics-data
		Removed:

	'dataProcesses' has been modified:
		Before:
			Pipeline v3.0
			Submit data
			Sample comparison
			Text Search
			Sequence Search With HMMER
			Browse Data
		After:
			Pipeline v.4.1
			Submit data
			Sample comparison
			Text Search
			Sequence Search With HMMER
			Browse Data
		Added:
			Pipeline v.4.1
		Removed:
			Pipeline v3.0

	'onto_domains' has been modified:
		Before:
			Annotation
			DNA sequence
			Gene prediction
			Metagenome
			Sequence annotation
			gene
			genome
			ncRNA
			rRNA_16S
		After:
			Annotation
			DNA sequence
			Gene prediction
			Metagenome
			Sequence annotation
			gene
			genome
			microbiome
			ncRNA
			rRNA_16S
		Added:
			microbiome
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.dxj07r' by 'The FAIRsharing Team' at 12:01, 17 Jan 2019 (approved):

	'organizations' has been modified:
		Before:
			Biotechnology and Biological Sciences Research Council (BBSRC), UK|https://bbsrc.ukri.org|Funds
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
			Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains
		After:
			Biotechnology and Biological Sciences Research Council (BBSRC), UK|https://bbsrc.ukri.org|Funds
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
			European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK|https://www.ebi.ac.uk/|Maintains
		Added:
			European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK|https://www.ebi.ac.uk/|Maintains
		Removed:
			Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains

	'supportLinks' has been modified:
		Before:
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour
			contact form|http://www.ebi.ac.uk/support/metagenomics
			online documentation|https://www.ebi.ac.uk/metagenomics/about
			twitter|@EBImetagenomics
		After:
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-submitting-metagenomics-data-to-the-european-nucleotide-archive
			TeSS training|https://tess.elixir-europe.org/materials/ebi-metagenomics-portal-quick-tour
			contact form|http://www.ebi.ac.uk/support/metagenomics
			online documentation|https://www.ebi.ac.uk/metagenomics/about
			twitter|@MGnifyDB
		Added:
			twitter|@MGnifyDB
		Removed:
			twitter|@EBImetagenomics

	'licences' has been modified:
		Before:
		After:
			EBI Terms of Use|http://www.ebi.ac.uk/about/terms-of-use|Data
		Added:
			EBI Terms of Use|http://www.ebi.ac.uk/about/terms-of-use|Data
		Removed:

	'dataProcesses' has been modified:
		Before:
			Pipeline v3.0
			Submit data
			Trimmomatic
			QIIME
			FranGeneScan
			InterproScan
			Sample comparison
			Functional analysis
			Taxonomy analysis
		After:
			Pipeline v3.0
			Submit data
			Sample comparison
			Text Search
			Sequence Search With HMMER
			Browse Data
		Added:
			Text Search
			Sequence Search With HMMER
			Browse Data
		Removed:
			Trimmomatic
			QIIME
			FranGeneScan
			InterproScan
			Functional analysis
			Taxonomy analysis

	'miriam_id' has been modified:
		Before: 
		After: MIR:00000535

	'accessPoints' has been modified:
		Before:
		After:
			REST|https://www.ebi.ac.uk/metagenomics/api/v1/|MGnify API
		Added:
			REST|https://www.ebi.ac.uk/metagenomics/api/v1/|MGnify API
		Removed:

            

Edits to 'https://fairsharing.org/FAIRsharing.dxj07r' by 'The FAIRsharing Team' at 15:07, 22 Aug 2018 (approved):

	'shortname' has been modified:
		Before: MGnify (formerly EBI Metagenomics)
		After: MGnify

	'name' has been modified:
		Before: MGnify (formerly EBI Metagenomics)
		After: MGnify

	'description' has been modified:
		Before: EBI Metagenomics has now changed its name to MGnify to reflect soon to come future updates. A new website is currently being trialed. https://www.ebi.ac.uk/metagenomics/beta/  EBI Metagenome is a free-to-use resource aiming at supporting all metagenomics researchers. The service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. You can freely browse all the public data in the repository.  
		After: EBI Metagenomics has changed its name to MGnify to reflect a change in scope. This is a free-to-use resource aiming at supporting all metagenomics researchers. The service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. You can freely browse all the public data in the repository.  

            

Edits to 'https://fairsharing.org/FAIRsharing.dxj07r' by 'The FAIRsharing Team' at 19:17, 26 Jul 2018 (approved):

	'organizations' has been modified:
		Before:
			Biotechnology and Biological Sciences Research Council (BBSRC), UK|http://www.bbsrc.ac.uk/|Funds
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Undefined
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Maintains
			Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains
		After:
			Biotechnology and Biological Sciences Research Council (BBSRC), UK|http://www.bbsrc.ac.uk/|Funds
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
			Swiss Institute of Bioinformatics (SIB), Switzerland|https://www.sib.swiss|Maintains
		Added:
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Funds
		Removed:
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Undefined
			European Commission under FP7 Grant Agreement|http://ec.europa.eu/research/fp7/index_en.cfm?pg=documents|Maintains

	'name' has been modified:
		Before: EBI Metagenomics
		After: MGnify (formerly EBI Metagenomics)

	'contact' has been modified:
		Before: EBI Metagenomics
		After: General Contact

	'miriam_id' has been modified:
		Before: None
		After: 

	'publications' has been modified:
		Before:
			EBI metagenomics--a new resource for the analysis and archiving of metagenomic data.|Hunter S,Corbett M,Denise H,Fraser M,Gonzalez-Beltran A,Hunter C,Jones P,Leinonen R,McAnulla C,Maguire E,Maslen J,Mitchell A,Nuka G,Oisel A,Pesseat S,Radhakrishnan R,Rocca-Serra P,Scheremetjew M,Sterk P,Vaughan D,Cochrane G,Field D,Sansone SA|Nucleic Acids Res|2014
		After:
			EBI metagenomics--a new resource for the analysis and archiving of metagenomic data.|Hunter S,Corbett M,Denise H,Fraser M,Gonzalez-Beltran A,Hunter C,Jones P,Leinonen R,McAnulla C,Maguire E,Maslen J,Mitchell A,Nuka G,Oisel A,Pesseat S,Radhakrishnan R,Rocca-Serra P,Scheremetjew M,Sterk P,Vaughan D,Cochrane G,Field D,Sansone SA|Nucleic Acids Res|2014
			EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.|Mitchell AL,Scheremetjew M,Denise H,Potter S,Tarkowska A,Qureshi M,Salazar GA,Pesseat S,Boland MA,Hunter FMI,Ten Hoopen P,Alako B,Amid C,Wilkinson DJ,Curtis TP,Cochrane G,Finn RD|Nucleic Acids Res|2017
		Added:
			EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.|Mitchell AL,Scheremetjew M,Denise H,Potter S,Tarkowska A,Qureshi M,Salazar GA,Pesseat S,Boland MA,Hunter FMI,Ten Hoopen P,Alako B,Amid C,Wilkinson DJ,Curtis TP,Cochrane G,Finn RD|Nucleic Acids Res|2017
		Removed:

	'shortname' has been modified:
		Before: EBI Metagenomics
		After: MGnify (formerly EBI Metagenomics)

	'description' has been modified:
		Before: "EBI Metagenomics" is a free-to-use resource aiming at supporting all metagenomics researchers. The service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. You can freely browse all the public data in the repository. 
		After: EBI Metagenomics has now changed its name to MGnify to reflect soon to come future updates. A new website is currently being trialed. https://www.ebi.ac.uk/metagenomics/beta/  EBI Metagenome is a free-to-use resource aiming at supporting all metagenomics researchers. The service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. You can freely browse all the public data in the repository.