Databases > biodbcore-000704

ready short Open Reading Frame database

Abbreviation:sorfs.org

General Information
sORFs.org is a database for sORFs identified using ribosome profiling. Starting from ribosome profiling, sORFs.org identifies sORFs, incorporates state-of-the-art tools and metrics and stores results in a public database. Two query interfaces are provided, a default one enabling quick lookup of sORFs and a BioMart interface providing advanced query and export possibilities. At present, sORFs.org harbors 263 354 sORFs that demonstrate ribosome occupancy, originating from three different cell lines: HCT116 (human), E14_mESC (mouse) and S2 (fruit fly).



This record is maintained by volexiou

Record added: Nov. 3, 2015, 9:44 a.m.
Record updated: Jan. 6, 2017, 2:59 p.m. by The FAIRsharing Team.


Support

General

Additional Information


Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Curation

Data Access




Connectivity
Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined


Related Databases

No related databases defined


Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Funds

Maintains

Grant Number(s)

  • 12A7813N (Fonds Wetenschappelijk Onderzoek)

  • G0D3114N (Fonds Wetenschappelijk Onderzoek)


Publications

sORFs.org: a repository of small ORFs identified by ribosome profiling.

Olexiouk V,Crappe J,Verbruggen S,Verhegen K,Martens L,Menschaert G
Nucleic Acids Res 2015

View Paper (PubMed) View Paper (DOI)