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Databases > biodbcore-000735

ready Physiome Model Repository

Abbreviation:PMR

General Information
The Physiome Model Repository (PMR) is the main online repository for the IUPS Physiome Project, providing version and access controlled repositories, called workspaces, for users to store their data. PMR also provides a mechanism to create persistent access to specific revisions of a workspace, termed exposures. Exposure plugins are available for specific types of data (e.g., CellML or FieldML documents) which enable customizable views of the data when browsing the repository via a web browser, or an application accessing the repository’s content via web services.


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This record is maintained by andre  ORCID

Record added: Jan. 22, 2016, 3:31 a.m.
Record updated: May 31, 2017, 2:49 p.m. by The FAIRsharing Team.


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Access / Retrieve Data

Conditions of Use



REST Web Services



Connectivity
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Publications

The Physiome Model Repository 2.

Yu T,Lloyd CM,Nickerson DP,Cooling MT,Miller AK,Garny A,Terkildsen JR,Lawson J,Britten RD,Hunter PJ,Nielsen PM
Bioinformatics 2011

View Paper (PubMed) View Paper (DOI)

Toward a curated CellML model repository.

Nickerson D,Stevens C,Halstead M,Hunter P,Nielsen P
Conf Proc IEEE Eng Med Biol Soc 2007

View Paper (PubMed) View Paper (DOI)

The CellML Model Repository.

Lloyd CM,Lawson JR,Hunter PJ,Nielsen PF
Bioinformatics 2008

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CellML metadata standards, associated tools and repositories.

Beard DA,Britten R,Cooling MT,Garny A,Halstead MD,Hunter PJ,Lawson J,Lloyd CM,Marsh J,Miller A,Nickerson DP,Nielsen PM,Nomura T,Subramanium S,Wimalaratne SM,Yu T
Philos Trans A Math Phys Eng Sci 2009

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Revision history aware repositories of computational models of biological systems.

Miller AK,Yu T,Britten R,Cooling MT,Lawson J,Cowan D,Garny A,Halstead MD,Hunter PJ,Nickerson DP,Nunns G,Wimalaratne SM,Nielsen PM
BMC Bioinformatics 2011

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The Human Physiome: how standards, software and innovative service infrastructures are providing the building blocks to make it achievable.

Nickerson D,Atalag K,de Bono B,Geiger J,Goble C,Hollmann S,Lonien J,Muller W,Regierer B,Stanford NJ,Golebiewski M,Hunter P
Interface Focus 2016

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