Databases > DOI:10.25504/FAIRsharing.7ykpy5
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ready ENCODE Project

Abbreviation:ENCODE

General Information
The ENCODE (Encyclopedia of DNA Elements) Consortium is an international collaboration of research groups funded by the National Human Genome Research Institute (NHGRI). The goal of ENCODE is to build a comprehensive parts list of functional elements in the human genome, including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active. ENCODE results from 2007 and later are available from this project. This covers data generated during the two production phases 2007-2012 and 2013-present.

Homepage https://www.encodeproject.org/

Developed in United States

Created in 2013






How to cite this record FAIRsharing.org: ENCODE; ENCODE Project ; DOI: 10.25504/FAIRsharing.7ykpy5; Last edited: April 10, 2018, 9:43 a.m.; Last accessed: Jun 22 2018 11:29 p.m.


This record is maintained by ENCODE DCC  (encodedcc)

Record added: April 13, 2016, 3:37 p.m.
Record updated: April 10, 2018, 9:43 a.m. by The FAIRsharing Team.


Support

General

help https://www.encodeproject.org/help/conta ...
Mailing List None
twitter @encodedcc

Additional Information

Contact J Michael Cherry   ORCID

Tools
UCSC Genome Browser http://genome.ucsc.edu/

Access / Retrieve Data

Conditions of Use



REST Web Services

ENCODE REST API https://www.encodeproject.org/help/rest-api/


Publications

Ontology application and use at the ENCODE DCC.

Malladi VS,Erickson DT,Podduturi NR,Rowe LD,Chan ET,Davidson JM,Hitz BC,Ho M,Lee BT,Miyasato S,Roe GR,Simison M,Sloan CA,Strattan JS,Tanaka F,Kent WJ,Cherry JM,Hong EL
Database (Oxford) 2015

View Paper (PubMed) View Paper (DOI)

ENCODE data at the ENCODE portal.

Sloan CA,Chan ET,Davidson JM,Malladi VS,Strattan JS,Hitz BC,Gabdank I,Narayanan AK,Ho M,Lee BT,Rowe LD,Dreszer TR,Roe G,Podduturi NR,Tanaka F,Hong EL,Cherry JM
Nucleic Acids Res 2015

View Paper (PubMed) View Paper (DOI)

Principles of metadata organization at the ENCODE data coordination center.

Hong EL,Sloan CA,Chan ET,Davidson JM,Malladi VS,Strattan JS,Hitz BC,Gabdank I,Narayanan AK,Ho M,Lee BT,Rowe LD,Dreszer TR,Roe GR,Podduturi NR,Tanaka F,Hilton JA,Cherry JM
Database (Oxford) 2016

View Paper (PubMed) View Paper (DOI)




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