databases > DOI:10.25504/FAIRsharing.7ynng

ready CAMPSign

Abbreviation:CAMPSign is a tool for identification of antimicrobial peptides belonging to one of the 45 major AMP families present in CAMPR3.

General Information
CAMPSign is a tool for identification of antimicrobial peptides belonging to one of the 45 major AMP families present in CAMPR3. The peptides are identified based on family signatures such as patterns and HMMs generated for experimentally known AMPs. Users can submit sequences for screening the presence of these AMP signatures. Users can further BLAST the sequence/s of interest to find homologous sequences in popular AMP databases such as CAMP, APD, AVPdb, BACTIBASE etc. This work has been funded by grants from Department of Science & Technology, India and Indian Council of Medical Research.

Homepage http://www.campsign.bicnirrh.res.in

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Created in 2016






How to cite this record FAIRsharing.org: CAMPSign is a tool for identification of antimicrobial peptides belonging to one of the 45 major AMP families present in CAMPR3.; CAMPSign; DOI: https://doi.org/10.25504/FAIRsharing.7ynng; Last edited: Feb. 22, 2018, 3:01 p.m.; Last accessed: Nov 21 2018 6:35 p.m.


This record is maintained by biomedinfonirrh  ORCID

Record added: Aug. 10, 2016, 2:30 p.m.
Record updated: Feb. 22, 2018, 3:01 p.m. by The FAIRsharing Team (automatic update).



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Publications

Leveraging family-specific signatures for AMP discovery and high-throughput annotation.

Waghu FH, Barai RS, Idicula-Thomas S.
Scientific Reports 2016

View Paper (PubMed) View Publication

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