databases > DOI:10.25504/FAIRsharing.68f4xz
Did we miss something? Our COVID-19 Collection is growing, but not yet complete. Tell us what's missing. Email contact@fairsharing.org or add missing resources to our spreadsheet

ready mirDNMR

General Information
mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases.

Homepage https://www.wzgenomics.cn/mirdnmr/

Countries that developed this resource China

Created in 2016

Taxonomic range





How to cite this record FAIRsharing.org: mirDNMR; mirDNMR; DOI: https://doi.org/10.25504/FAIRsharing.68f4xz; Last edited: Jan. 8, 2019, 1:23 p.m.; Last accessed: Aug 13 2020 3:05 a.m.


This record is maintained by YiJiang

Record added: Nov. 3, 2016, 12:12 p.m.
Record updated: Nov. 8, 2016, 9:01 p.m. by The FAIRsharing Team.

Show edit history




Access / Retrieve Data

Conditions of Use


Data Access

Browse https://www.wzgenomics.cn/mirdnmr/tableDNMR.php
Download data https://www.wzgenomics.cn/mirdnmr/download.php



Publications

mirDNMR: a gene-centered database of background de novo mutation rates in human.

Jiang Y,Li Z,Liu Z,Chen D,Wu W,Du Y,Ji L,Jin ZB,Li W,Wu J
Nucleic Acids Res 2016

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

  • This record is maintained by YiJiang

Maintains