Databases > DOI:10.25504/FAIRsharing.g3j5qj

ready Orthologous MAtrix

Abbreviation:OMA

General Information
The OMA (“Orthologous MAtrix”) project is a method and database for the inference of orthologs among complete genomes. The distinctive features of OMA are its broad scope and size, high quality of inferences, feature-rich web interface, availability of data in a wide range of formats and interfaces, and frequent update schedule of two releases per year.

Homepage http://omabrowser.org/oma/about/

Developed in Switzerland

Created in 2007

Taxonomic range


Scope and data types






How to cite this record FAIRsharing.org: OMA; Orthologous MAtrix; DOI: 10.25504/FAIRsharing.g3j5qj; Last edited: Feb. 22, 2018, 3:03 p.m.; Last accessed: Jun 23 2018 2:55 p.m.


Record added: March 14, 2017, 2:34 p.m.
Record updated: Feb. 22, 2018, 3:03 p.m. by The FAIRsharing Team.



Support

General

Additional Information


Tools

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Access / Retrieve Data

Conditions of Use

Applies to: Data use

Data Release

Data Access


SOAP Web Services

Other Web Services



Publications

The OMA orthology database in 2015: function predictions, better plant support, synteny view and other improvements.

Altenhoff AM,Skunca N,Glover N,Train CM,Sueki A,Pilizota I,Gori K,Tomiczek B,Muller S,Redestig H,Gonnet GH,Dessimoz C
Nucleic Acids Res 2014

View Paper (PubMed) View Paper (DOI)

OMA 2011: orthology inference among 1000 complete genomes.

Altenhoff AM,Schneider A,Gonnet GH,Dessimoz C
Nucleic Acids Res 2010

View Paper (PubMed) View Paper (DOI)

OMA Browser--exploring orthologous relations across 352 complete genomes.

Schneider A,Dessimoz C,Gonnet GH
Bioinformatics 2007

View Paper (PubMed) View Paper (DOI)

Algorithm of OMA for large-scale orthology inference.

Roth AC,Gonnet GH,Dessimoz C
BMC Bioinformatics 2008

View Paper (PubMed) View Paper (DOI)

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