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ready Omics Discovery Index

Abbreviation:OmicsDI

General Information
The Omics Discovery Index (OmicsDI) provides dataset discovery across a heterogeneous, distributed group of Transcriptomics, Genomics, Proteomics and Metabolomics data resources spanning eight repositories in three continents and six organisations, including both open and controlled access data resources. The resource provides a short description of every dataset: accession, description, sample/data protocols biological evidences, publication, etc. Based on these metadata, OmicsDI provides extensive search capabilities, as well as identification of related datasets by metadata and data content where possible. In particular, OmicsDI identifies groups of related, multi-omics datasets across repositories by shared identifiers.




How to cite this record FAIRsharing.org: OmicsDI; Omics Discovery Index; DOI: https://doi.org/10.25504/FAIRsharing.re1278; Last edited: March 2, 2020, 12:25 p.m.; Last accessed: Jul 07 2020 11:40 p.m.

Publication for citation  Discovering and linking public omics data sets using the Omics Discovery Index. Perez-Riverol Y,Bai M,da Veiga Leprevost F,Squizzato S,Park YM,Haug K,Carroll AJ,Spalding D,Paschall J,Wang M,Del-Toro N,Ternent T,Zhang P,Buso N,Bandeira N,Deutsch EW,Campbell DS,Beavis RC,Salek RM,Sarkans U,Petryszak R,Keays M,Fahy E,Sud M,Subramaniam S,Barbera A,Jimenez RC,Nesvizhskii AI,Sansone SA,Steinbeck C,Lopez R,Vizcaino JA,Ping P,Hermjakob H; Nat Biotechnol ; 2017; 10.1038/nbt.3790;


This record is maintained by gdass@ebi.ac.uk

Record added: Oct. 5, 2017, 2:47 p.m.
Record updated: March 2, 2020, 12:25 p.m. by The FAIRsharing Team.

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Discovering and linking public omics data sets using the Omics Discovery Index.

Perez-Riverol Y,Bai M,da Veiga Leprevost F,Squizzato S,Park YM,Haug K,Carroll AJ,Spalding D,Paschall J,Wang M,Del-Toro N,Ternent T,Zhang P,Buso N,Bandeira N,Deutsch EW,Campbell DS,Beavis RC,Salek RM,Sarkans U,Petryszak R,Keays M,Fahy E,Sud M,Subramaniam S,Barbera A,Jimenez RC,Nesvizhskii AI,Sansone SA,Steinbeck C,Lopez R,Vizcaino JA,Ping P,Hermjakob H
Nat Biotechnol 2017

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