Databases > DOI:10.25504/FAIRsharing.8nq9t6

ready The Network Data Exchange (NDEx)


General Information
NDEx is an online commons where scientists can upload, share, and publicly distribute biological networks and pathway models. The NDEx Project maintains a web-accessible public server, a documentation website, provides seamless connectivity to Cytoscape as well as programmatic access using a variety of languages including Python and Java. NDEx users can easily create accounts or sign in using their Google credentials thanks to the supported open authentication (OAUTH2) method and mint DOIs for their networks to use in publications or include in other resources for long term access.

How to cite this record: NDEx; The Network Data Exchange (NDEx); DOI:; Last edited: Feb. 22, 2018, 3:06 p.m.; Last accessed: Mar 24 2018 4:14 a.m.

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This record is maintained by @NDExProject

Record added: Nov. 28, 2017, 9:57 p.m.
Record updated: Jan. 11, 2018, 12:45 p.m. by The FAIRsharing Team.



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NDEx: A Community Resource for Sharing and Publishing of Biological Networks.

Pillich RT,Chen J,Rynkov V,Welker D,Pratt D
Methods Mol Biol 2017

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NDEx, the Network Data Exchange.

Pratt D,Chen J,Welker D,Rivas R,Pillich R,Rynkov V,Ono K,Miello C,Hicks L,Szalma S,Stojmirovic A,Dobrin R,Braxenthaler M,Kuentzer J,Demchak B,Ideker T
Cell Syst 2015

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NDEx 2.0: A Clearinghouse for Research on Cancer Pathways.

Pratt D,Chen J,Pillich R,Rynkov V,Gary A,Demchak B,Ideker T
Cancer Res 2017

View Paper (PubMed) View Paper (DOI)