Databases > DOI:10.25504/FAIRsharing.z4xpxx

ready Agroportal

General Information
The AgroPortal project aims to offer a reference ontology repository for agronomy, reusing the NCBO BioPortal technology. Many vocabularies and ontologies are produced to represent and annotate agronomic data. Therefore, there is a need of a common platform to identify, host and use them in agro-informatics application. Agroportal features ontology hosting, search, versioning, visualization, comment, recommendation, enables semantic annotation, as well as storing and exploiting ontology alignments. All of these within a fully semantic web compliant infrastructure. The AgroPortal specifically pays attention to respect the requirements of the agronomic community in terms of ontology formats (e.g., SKOS, trait dictionaries) or supported features. AgroPortal project is based on five driving agronomic use cases which participate in the design and orientation of the platform. AgroPortal already offers a robust and stable reference repository highly valuable for the agronomic domain.

How to cite this record: FAIRsharing.org: Agroportal; Agroportal; DOI: https://doi.org/10.25504/FAIRsharing.z4xpxx; Last edited: Feb. 22, 2018, 3:06 p.m.; Last accessed: Apr 19 2018 4:21 p.m.

Homepage http://agroportal.lirmm.fr

Developed in France

Created in 2015

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Record added: Nov. 21, 2017, 11:14 a.m.
Record updated: Nov. 21, 2017, 11:15 a.m. by The FAIRsharing Team.


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Publications

BioPortal: ontologies and integrated data resources at the click of a mouse.

Noy NF,Shah NH,Whetzel PL,Dai B,Dorf M,Griffith N,Jonquet C,Rubin DL,Storey MA,Chute CG,Musen MA
Nucleic Acids Res 2009

View Paper (PubMed) View Paper (DOI)

Reusing the NCBO BioPortal technology for agronomy to build AgroPortal

Clément Jonquet, Anne Toulet, Elizabeth Arnaud, Sophie Aubin, Esther Dzalé-Yeumo, Vincent Emonet, John Graybeal, Mark A. Musen, Cyril Pommier & Pierre Larmande.
7th International Conference on Biomedical Ontologies, ICBO'16, Demo Session 2016


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Grant Number(s)

  • 701771 ( Marie Sklodowska-Curie)

  • ANR-10-LABX-20 (The French National Research Agency (ANR), France)

  • ANR-11-BINF-0002 (The French National Research Agency (ANR), France)

  • ANR-12-JS02-01001 (The French National Research Agency (ANR), France)