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Pancreatic Expression database

Abbreviation:PED

General Information

The Pancreatic Expression Database (PED) is a repository for pancreatic-derived -omics data. With a generic web-based system, the database provides the research community with an open access tool to mine currently available pancreatic cancer experimental data sets generated by using large-scale transcriptomic, genomic, proteomic, miRNA and methylomic platforms. The website also provides users with the opportunity to include their own published dataset in the database.

Homepage http://www.pancreasexpression.org/

Developed in United Kingdom

Created in 2006

Taxonomic range

Scope and data types

Awaiting DOI assignment.

Record added: Aug. 3, 2018, 10:51 a.m.
Record updated: Aug. 29, 2018, 5:06 p.m. by The FAIRsharing Team.

Show edit history

Edits to 'https://fairsharing.org/bsg-d001125' by 'The FAIRsharing Team' at 17:06, 29 Aug 2018 (not approved):

	'contactORCID' has been modified:
		Before: https://orcid.org/0000-0002-2488-0669
		After: 0000-0002-2488-0669

Edits to 'https://fairsharing.org/bsg-d001125' by 'The FAIRsharing Team' at 11:13, 03 Aug 2018 (not approved):

	'organizations' has been modified:
		Before:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
			Breast Cancer Campaign|http://www.bcacampaign.com/|Funds
			Pancreatic Cancer Research Fund|http://www.pcrf.org.uk/|Funds
		After:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
			Breast Cancer Campaign|http://www.bcacampaign.com/|Funds
			Pancreatic Cancer Research Fund|http://www.pcrf.org.uk/|Funds
			Barts Cancer Institute, London, UK|https://www.bci.qmul.ac.uk/en/|Maintains
		Added:
			Barts Cancer Institute, London, UK|https://www.bci.qmul.ac.uk/en/|Maintains
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	'supportLinks' has been modified:
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		After:
			email|help@pancreasexpression.org.uk
			help|http://www.pancreasexpression.org/includes/help.html
			online documentation|http://www.pancreasexpression.org/includes/query_examples.html
		Added:
			email|help@pancreasexpression.org.uk
			help|http://www.pancreasexpression.org/includes/help.html
			online documentation|http://www.pancreasexpression.org/includes/query_examples.html
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	'dataProcesses' has been modified:
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			browse
			search
			submit
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			browse
			search
			submit
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Edits to 'https://fairsharing.org/bsg-d001125' by 'The FAIRsharing Team' at 11:10, 03 Aug 2018 (not approved):

	'organizations' has been modified:
		Before:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
			Breast Cancer Campaign|http://www.bcacampaign.com/|Funds
		After:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
			Breast Cancer Campaign|http://www.bcacampaign.com/|Funds
			Pancreatic Cancer Research Fund|http://www.pcrf.org.uk/|Funds
		Added:
			Pancreatic Cancer Research Fund|http://www.pcrf.org.uk/|Funds
		Removed:

Edits to 'https://fairsharing.org/bsg-d001125' by 'The FAIRsharing Team' at 11:05, 03 Aug 2018 (not approved):

	'organizations' has been modified:
		Before:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
		After:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
			Breast Cancer Campaign|http://www.bcacampaign.com/|Funds
		Added:
			Breast Cancer Campaign|http://www.bcacampaign.com/|Funds
		Removed:

Edits to 'https://fairsharing.org/bsg-d001125' by 'The FAIRsharing Team' at 11:02, 03 Aug 2018 (not approved):

	'domains' has been modified:
		Before:
			Biomedical Science
			Cancer
			Genomics
			Life Science
			Methylation
			Micro RNA (miRNA)
			Proteomics
			Transcriptomics
		After:
			Biomedical Science
			Cancer
			Genomics
			Life Science
			Literature curation
			Methylation
			Micro RNA (miRNA)
			Proteomics
			Transcriptomics
		Added:
			Literature curation
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Edits to 'https://fairsharing.org/bsg-d001125' by 'The FAIRsharing Team' at 11:00, 03 Aug 2018 (not approved):

	'organizations' has been modified:
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		After:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
		Added:
			FW6 EU project MolDiag-Paca and Cancer Research UK programme|https://www.cancerresearchuk.org/funding-for-researchers/our-funding-schemes/science-committee-programme-awards|Funds
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	'grants' has been modified:
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			C355/A6253
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			C355/A6253
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Edits to 'https://fairsharing.org/bsg-d001125' by 'The FAIRsharing Team' at 10:57, 03 Aug 2018 (not approved):

	'related_databases' has been modified:
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		After:
			Ensembl
			The Cancer Genome Atlas
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			Ensembl
			The Cancer Genome Atlas
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	'publications' has been modified:
		Before:
			The Pancreatic Expression database: 2011 update.|Cutts RJ,Gadaleta E,Hahn SA,Crnogorac-Jurcevic T,Lemoine NR,Chelala C|Nucleic Acids Res|2010
		After:
			The Pancreatic Expression database: 2011 update.|Cutts RJ,Gadaleta E,Hahn SA,Crnogorac-Jurcevic T,Lemoine NR,Chelala C|Nucleic Acids Res|2010
			Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets.|Chelala C,Hahn SA,Whiteman HJ,Barry S,Hariharan D,Radon TP,Lemoine NR,Crnogorac-Jurcevic T|BMC Genomics|2007
			The pancreatic expression database: recent extensions and updates.|Dayem Ullah AZ,Cutts RJ,Ghetia M,Gadaleta E,Hahn SA,Crnogorac-Jurcevic T,Lemoine NR,Chelala C|Nucleic Acids Res|2013
			The Pancreatic Expression Database: 2018 update.|Marzec J,Dayem Ullah AZ,Pirro S,Gadaleta E,Crnogorac-Jurcevic T,Lemoine NR,Kocher HM,Chelala C|Nucleic Acids Res|2017
		Added:
			Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets.|Chelala C,Hahn SA,Whiteman HJ,Barry S,Hariharan D,Radon TP,Lemoine NR,Crnogorac-Jurcevic T|BMC Genomics|2007
			The pancreatic expression database: recent extensions and updates.|Dayem Ullah AZ,Cutts RJ,Ghetia M,Gadaleta E,Hahn SA,Crnogorac-Jurcevic T,Lemoine NR,Chelala C|Nucleic Acids Res|2013
			The Pancreatic Expression Database: 2018 update.|Marzec J,Dayem Ullah AZ,Pirro S,Gadaleta E,Crnogorac-Jurcevic T,Lemoine NR,Kocher HM,Chelala C|Nucleic Acids Res|2017
		Removed:

Support

General

support email	help@pancreasexpression.org.uk
help	http://www.pancreasexpression.org/includ ...
online documentation	http://www.pancreasexpression.org/includ ...

Additional Information

Contact

Claude Chelala ORCID

Tools

No tools defined

Access / Retrieve Data

Conditions of Use

Data Curation

submit

http://www.pancreasexpression.org/includes/help.html

Data Access

browse	http://www.analytics.pancreasexpression.org/
search	http://www.pancreasexpression.org/includes/PancreaticCancerLandscape.h ...

Publications

The Pancreatic Expression database: 2011 update.

Cutts RJ,Gadaleta E,Hahn SA,Crnogorac-Jurcevic T,Lemoine NR,Chelala C
Nucleic Acids Res 2010

View Paper (PubMed) View Publication

Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets.

Chelala C,Hahn SA,Whiteman HJ,Barry S,Hariharan D,Radon TP,Lemoine NR,Crnogorac-Jurcevic T
BMC Genomics 2007

View Paper (PubMed) View Publication

The pancreatic expression database: recent extensions and updates.

Dayem Ullah AZ,Cutts RJ,Ghetia M,Gadaleta E,Hahn SA,Crnogorac-Jurcevic T,Lemoine NR,Chelala C
Nucleic Acids Res 2013

View Paper (PubMed) View Publication

The Pancreatic Expression Database: 2018 update.

Marzec J,Dayem Ullah AZ,Pirro S,Gadaleta E,Crnogorac-Jurcevic T,Lemoine NR,Kocher HM,Chelala C
Nucleic Acids Res 2017

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Related Databases

Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

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Funds

FW6 EU project MolDiag-Paca and Cancer Research UK programme (Government body)
Breast Cancer Campaign (Charitable foundation)
Pancreatic Cancer Research Fund (Charitable foundation)

Maintains

Barts Cancer Institute, London, UK (Research institute)

Grant Number(s)

C355/A6253 (FW6 EU project MolDiag-Paca and Cancer Research UK programme)

Pancreatic Expression database

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