databases > DOI:10.25504/FAIRsharing.VW2yBw
Did we miss something? Our COVID-19 Collection is growing, but not yet complete. Tell us what's missing. Email contact@fairsharing.org or add missing resources to our spreadsheet

ready Genome3D

General Information
Genome3D is a resource that provides structural annotation and 3D models of genomes of model organisms such as human, yeast and E.coli. The database can be used to predict protein structures that have not yet been identified. Genome3D uses structural classification data from several UK-based resources including CATH and SCOP.




How to cite this record FAIRsharing.org: Genome3D; Genome3D; DOI: https://doi.org/10.25504/FAIRsharing.VW2yBw; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Aug 04 2020 4:10 a.m.

Publication for citation  Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cuff A,Dana JM,Filippis I,Gough J,Hunter S,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mitchell A,Murzin AG,Ochoa-Montano B,Rackham OJ,Smith J,Sternberg MJ,Velankar S,Yeats C,Orengo C; Nucleic Acids Res ; 2012; 10.1093/nar/gks1266;


This record is maintained by isillitoe  ORCID

Record added: Aug. 3, 2018, 9 p.m.
Record updated: Nov. 21, 2018, 10:03 a.m. by The FAIRsharing Team.

Show edit history


In Collections

Support

Tools

    No tools defined


Access / Retrieve Data

Conditions of Use


Data Access




Publications

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.

Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cuff A,Dana JM,Filippis I,Gough J,Hunter S,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mitchell A,Murzin AG,Ochoa-Montano B,Rackham OJ,Smith J,Sternberg MJ,Velankar S,Yeats C,Orengo C
Nucleic Acids Res 2012

View Paper (PubMed) View Publication

Genome3D: exploiting structure to help users understand their sequences.

Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cozzetto D,Dana JM,Filippis I,Gough J,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mistry J,Murzin AG,Ochoa-Montano B,Oates ME,Punta M,Rackham OJ,Stahlhacke J,Sternberg MJ,Velankar S,Orengo C
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

Related Standards

Reporting Guidelines

No guidelines defined

Terminology Artifacts

No semantic standards defined

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined



Implementing Policies

This record is not implemented by any policy.


Credit

Record Maintainer

Funds

Maintains

Grant Number(s)

  • BB/I025050/1] (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • MC U105192716 (Medical Research Council (MRC), London, UK)