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ready Genome3D

General Information
Genome3D is a resource that provides structural annotation and 3D models of genomes of model organisms such as human, yeast and E.coli. The database can be used to predict protein structures that have not yet been identified. Genome3D uses structural classification data from several UK-based resources including CATH and SCOP.

Homepage http://genome3d.eu

Developed in United Kingdom

Created in 2012

Subjects  BETA





Awaiting DOI assignment.

Publication for citation  Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cuff A,Dana JM,Filippis I,Gough J,Hunter S,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mitchell A,Murzin AG,Ochoa-Montano B,Rackham OJ,Smith J,Sternberg MJ,Velankar S,Yeats C,Orengo C; Nucleic Acids Res ; 2012; 10.1093/nar/gks1266;


Record added: Aug. 3, 2018, 9 p.m.
Record updated: Nov. 21, 2018, 10:03 a.m. by The FAIRsharing Team.

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FAQ http://genome3d.eu/wiki/page/Public/Page ...
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Contact Ian Sillitoe

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Search http://genome3d.eu/search
Browse http://genome3d.eu/search/?species=human



Publications

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.

Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cuff A,Dana JM,Filippis I,Gough J,Hunter S,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mitchell A,Murzin AG,Ochoa-Montano B,Rackham OJ,Smith J,Sternberg MJ,Velankar S,Yeats C,Orengo C
Nucleic Acids Res 2012

View Paper (PubMed) View Publication

Genome3D: exploiting structure to help users understand their sequences.

Lewis TE,Sillitoe I,Andreeva A,Blundell TL,Buchan DW,Chothia C,Cozzetto D,Dana JM,Filippis I,Gough J,Jones DT,Kelley LA,Kleywegt GJ,Minneci F,Mistry J,Murzin AG,Ochoa-Montano B,Oates ME,Punta M,Rackham OJ,Stahlhacke J,Sternberg MJ,Velankar S,Orengo C
Nucleic Acids Res 2014

View Paper (PubMed) View Publication

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Grant Number(s)

  • BB/I025050/1] (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

  • MC U105192716 (Medical Research Council (MRC), London, UK)