databases > DOI:10.25504/FAIRsharing.A0ozDj

ready Genome Properties

General Information
Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome. This is a reimplementation at EMBL-EBI of a resource previously hosted at JCVI.

Homepage https://www.ebi.ac.uk/interpro/genomeproperties

Countries that developed this resource European Union , United Kingdom , United States

Created in 2005

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How to cite this record FAIRsharing.org: Genome Properties; Genome Properties; DOI: https://doi.org/10.25504/FAIRsharing.A0ozDj; Last edited: Jan. 9, 2019, 3:06 p.m.; Last accessed: Dec 06 2019 11:15 p.m.

Publication for citation  Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes. Richardson LJ,Rawlings ND,Salazar GA,Almeida A,Haft DR,Ducq G,Sutton GG,Finn RD; Nucleic Acids Res ; 2018; 10.1093/nar/gky1013;


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Record added: Oct. 30, 2018, 2:18 p.m.
Record updated: Nov. 6, 2018, 1:34 p.m. by The FAIRsharing Team.

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Support

General

support email Genome properties helpdesk
online documentation About Genome properties
training Genome properties quick tour
training Genome properties tutorial

Additional Information

Contact Lorna Richardson   ORCID


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Applies to: Data use

Data Access

Browse Repository https://www.ebi.ac.uk/interpro/genomeproperties/#hierarchy
Repository Viewer https://www.ebi.ac.uk/interpro/genomeproperties/#viewer



Publications

Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes.

Richardson LJ,Rawlings ND,Salazar GA,Almeida A,Haft DR,Ducq G,Sutton GG,Finn RD
Nucleic Acids Res 2018

View Paper (PubMed) View Publication

Genome Properties: a system for the investigation of prokaryotic genetic content for microbiology, genome annotation and comparative genomics.

Haft DH,Selengut JD,Brinkac LM,Zafar N,White O
Bioinformatics 2004

View Paper (PubMed) View Publication

TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes.

Selengut JD,Haft DH,Davidsen T,Ganapathy A,Gwinn-Giglio M,Nelson WC,Richter AR,White O
Nucleic Acids Res 2006

View Paper (PubMed) View Publication

TIGRFAMs and Genome Properties in 2013.

Haft DH,Selengut JD,Richter RA,Harkins D,Basu MK,Beck E
Nucleic Acids Res 2012

View Paper (PubMed) View Publication

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