Domain-centric GO

Abbreviation:dcGO

General Information

Domain-centric GO provides associations between ontological terms and protein domains at the superfamily and family levels. Some functional units consist of more than one domain acting together or acting at an interface between domains; therefore, ontological terms associated with pairs of domains, triplets and longer supra-domains are also provided.

Homepage http://supfam.org/SUPERFAMILY/dcGO/index.html

Countries that developed this resource United Kingdom

Created in 2012

Taxonomic range

All

Knowledge Domains

Subjects

How to cite this record FAIRsharing.org: dcGO; Domain-centric GO; DOI: https://doi.org/10.25504/FAIRsharing.VXoFLf; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 21 2021 6:29 p.m.

Publication for citation dcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more Hai Fang, Julian Gough; Nucleic Acids Research, Volume 41, Issue D1, Pages D536–D544 ; 2013; 10.1093/nar/gks1080;

This record is maintained by supfam

Record added: Dec. 3, 2019, 10:57 a.m.
Record updated: Dec. 3, 2019, 11:09 a.m. by The FAIRsharing Team.

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Edits to 'https://fairsharing.org/FAIRsharing.VXoFLf' by 'The FAIRsharing Team' at 11:09, 03 Dec 2019 (approved):

	'publications' has been modified:
		Before:
		After:
			dcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more|Hai Fang, Julian Gough|Nucleic Acids Research, Volume 41, Issue D1, Pages D536D544|2013
		Added:
			dcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more|Hai Fang, Julian Gough|Nucleic Acids Research, Volume 41, Issue D1, Pages D536D544|2013
		Removed:

In Collections

RDA Covid-19 WG Resources

Support

General

online documentation	Algorithm details
online documentation	Background

Additional Information

Contact

Dr. Hai Fang

Tools

dcGO Predictor	http://supfam.org/SUPERFAMILY/cgi-bin/dcpredictormain.cgi
dcGO Enrichment	http://supfam.org/SUPERFAMILY/cgi-bin/dcenrichment.cgi
dcGO Pevo	http://supfam.org/SUPERFAMILY/cgi-bin/dcpevo.cgi

Access / Retrieve Data

Conditions of Use

Data Release

Download dcGO

http://supfam.org/SUPERFAMILY/cgi-bin/dcdownload.cgi

Data Access

Faceted Search	http://supfam.org/SUPERFAMILY/cgi-bin/dcsearch.cgi
Search Species Tree of Life Hierarchy	http://supfam.org/SUPERFAMILY/cgi-bin/dctree.cgi
Browse PFAM hierarchy	http://supfam.org/SUPERFAMILY/cgi-bin/dcpfam.cgi
Browse other biological ontology hierarchies	http://supfam.org/SUPERFAMILY/cgi-bin/dcbo.cgi
Browse GO hierarchy	http://supfam.org/SUPERFAMILY/cgi-bin/dcgo.cgi
Browse SCOP hierarchy	http://supfam.org/SUPERFAMILY/cgi-bin/dcscop.cgi

Publications

dcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more

Hai Fang, Julian Gough
Nucleic Acids Research, Volume 41, Issue D1, Pages D536–D544 2013

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Reporting Guidelines

No guidelines defined

Terminology Artifacts

Models and Formats

No syntax standards defined

Identifier Schemas

No identifier schema standards defined

Metrics

No metrics standards defined

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Implementing Policies

This record is not implemented by any policy.

Credit

Record Maintainer

This record is maintained by supfam

Funds

Biotechnology and Biological Sciences Research Council (BBSRC), UK (Government body)

Maintains

Department of Computer Science, University of Bristol, UK (University) Lead

Grant Number(s)

BBSRC Tools and Resources Development Fund: BB/L018543/1 (Biotechnology and Biological Sciences Research Council (BBSRC), UK)

Domain-centric GO

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