databases > DOI:10.25504/FAIRsharing.CFLgLo

ready Chickspress

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Chickspress is a gene expression database for chicken tissues. Chickspress incorporates both NCBI and Ensembl gene models and links these gene sets with experimental gene expression data and QTL information. By linking gene models from both NCBI and Ensembl gene prediction pipelines, researchers can compare gene models from each of these prediction workflows to available experimental data. We use Chickspress data to show the differences between these gene annotation pipelines. Chickspress also provides rapid search, visualization and download capacity for chicken gene sets based upon tissue type, developmental stage and experiment type. Chickspress includes a core set of Red Jungle Fowl RNA and peptide data collected across multiple tissues from both male and female birds and public expression data sets.




How to cite this record FAIRsharing.org: Chickspress; Chickspress; DOI: https://doi.org/10.25504/FAIRsharing.CFLgLo; Last edited: Jan. 21, 2020, 11:02 a.m.; Last accessed: Jan 21 2020 12:44 p.m.

Publication for citation  Chickspress: a resource for chicken gene expression. McCarthy FM,Pendarvis K,Cooksey AM,Gresham CR,Bomhoff M,Davey S,Lyons E,Sonstegard TS,Bridges SM,Burgess SC; Database (Oxford) ; 2019; 10.1093/database/baz058;


This record is maintained by fmccarthy

Record added: Dec. 3, 2019, 2:02 p.m.
Record updated: Jan. 21, 2020, 11:02 a.m. by The FAIRsharing Team.



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Chickspress: a resource for chicken gene expression.

McCarthy FM,Pendarvis K,Cooksey AM,Gresham CR,Bomhoff M,Davey S,Lyons E,Sonstegard TS,Bridges SM,Burgess SC
Database (Oxford) 2019

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