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InterMine
General Information
InterMine was formed in 2002 at the University of Cambridge, originally as a Drosophila-dedicated resource, before expanding to become organism-agnostic, enabling a large range of organisations around the world to create their own InterMines. There are many instances of InterMine installations, relating to particular model organisms. These can be searched individually or via a cross-Mine search function.
How to cite this record
FAIRsharing.org: InterMine; InterMine; DOI: https://doi.org/10.25504/FAIRsharing.DXjTQ8;
Last edited: Jan. 21, 2020, 11:02 a.m.; Last accessed: Apr 06 2020 5:14 a.m.
Publication for citation
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data.
Smith RN,Aleksic J,Butano D,Carr A,Contrino S,Hu F,Lyne M,Lyne R,Kalderimis A,Rutherford K,Stepan R,Sullivan J,Wakeling M,Watkins X,Micklem G; Bioinformatics ;
2012;
10.1093/bioinformatics/bts577;
Record added: Dec. 19, 2019, 1:56 p.m.
Record updated:
Dec. 19, 2019, 2:53 p.m. by yochannah.
Show edit history
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Edits to 'https://fairsharing.org/FAIRsharing.DXjTQ8' by 'yochannah' at 14:53, 19 Dec 2019 (approved):
'related_databases' has been modified:
Before:
modMine
Cancer Genome Mine
FlyMine
MouseMine @ MGI
BeanMine
ChickpeaMine
HymenopteraMine
CowpeaMine
RatMine
WormMine
YeastMine
ZebrafishMine
HumanMine
LegumeMine
PeanutMine
SoyMine
MedicMine
BovineMine
CHOmine
GrapeMine
An INtegrated Data warehouse of mIcrobial GenOmes
PhytoMine
PlanMine
TargetMine
ThaleMine
XenMine
WheatMine
LocustMine
After:
modMine
FlyMine
MouseMine @ MGI
BeanMine
ChickpeaMine
HymenopteraMine
CowpeaMine
RatMine
WormMine
YeastMine
ZebrafishMine
HumanMine
LegumeMine
PeanutMine
SoyMine
MedicMine
BovineMine
CHOmine
GrapeMine
An INtegrated Data warehouse of mIcrobial GenOmes
PhytoMine
PlanMine
TargetMine
ThaleMine
XenMine
WheatMine
LocustMine
Added:
Removed:
Cancer Genome Mine
Edits to 'https://fairsharing.org/FAIRsharing.DXjTQ8' by 'The FAIRsharing Team' at 14:09, 19 Dec 2019 (approved):
'related_databases' has been modified:
Before:
modMine
Cancer Genome Mine
FlyMine
MouseMine @ MGI
BeanMine
ChickpeaMine
HymenopteraMine
CowpeaMine
RatMine
WormMine
YeastMine
ZebrafishMine
HumanMine
LegumeMine
PeanutMine
SoyMine
MedicMine
BovineMine
CHOmine
GrapeMine
PhytoMine
PlanMine
TargetMine
ThaleMine
XenMine
WheatMine
LocustMine
After:
modMine
Cancer Genome Mine
FlyMine
MouseMine @ MGI
BeanMine
ChickpeaMine
HymenopteraMine
CowpeaMine
RatMine
WormMine
YeastMine
ZebrafishMine
HumanMine
LegumeMine
PeanutMine
SoyMine
MedicMine
BovineMine
CHOmine
GrapeMine
An INtegrated Data warehouse of mIcrobial GenOmes
PhytoMine
PlanMine
TargetMine
ThaleMine
XenMine
WheatMine
LocustMine
Added:
An INtegrated Data warehouse of mIcrobial GenOmes
Removed:
'supportLinks' has been modified:
Before:
blog|https://intermineorg.wordpress.com/
help|https://flymine.readthedocs.io/en/latest/
mailing list|https://lists.intermine.org/pipermail/dev/
online documentation|https://github.com/intermine
tess training|https://tess.elixir-europe.org/materials/model-organism-analysis-using-intermine
tess training|https://tess.elixir-europe.org/materials/intermine-user-manual
tess training|https://tess.elixir-europe.org/materials/intermine-2-0
tess training|https://tess.elixir-europe.org/materials/intermine-operator-manual
tess training|https://tess.elixir-europe.org/materials/intermine-user-tutorial
twitter|@intermineorg
After:
TeSS training|https://tess.elixir-europe.org/materials/intermine-user-manual
TeSS training|https://tess.elixir-europe.org/materials/intermine-user-tutorial
TeSS training|https://tess.elixir-europe.org/materials/intermine-operator-manual
TeSS training|https://tess.elixir-europe.org/materials/intermine-2-0
TeSS training|https://tess.elixir-europe.org/materials/model-organism-analysis-using-intermine
blog|https://intermineorg.wordpress.com/
help|https://flymine.readthedocs.io/en/latest/
mailing list|https://lists.intermine.org/pipermail/dev/
online documentation|https://github.com/intermine
twitter|@intermineorg
Added:
TeSS training|https://tess.elixir-europe.org/materials/intermine-user-manual
TeSS training|https://tess.elixir-europe.org/materials/intermine-user-tutorial
TeSS training|https://tess.elixir-europe.org/materials/intermine-operator-manual
TeSS training|https://tess.elixir-europe.org/materials/intermine-2-0
TeSS training|https://tess.elixir-europe.org/materials/model-organism-analysis-using-intermine
Removed:
tess training|https://tess.elixir-europe.org/materials/model-organism-analysis-using-intermine
tess training|https://tess.elixir-europe.org/materials/intermine-user-manual
tess training|https://tess.elixir-europe.org/materials/intermine-2-0
tess training|https://tess.elixir-europe.org/materials/intermine-operator-manual
tess training|https://tess.elixir-europe.org/materials/intermine-user-tutorial
Access / Retrieve Data
Conditions of Use
REST Web Services
Publications
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data.
Smith RN,Aleksic J,Butano D,Carr A,Contrino S,Hu F,Lyne M,Lyne R,Kalderimis A,Rutherford K,Stepan R,Sullivan J,Wakeling M,Watkins X,Micklem G
Bioinformatics 2012
View Paper (PubMed)
View Publication
InterMine: extensive web services for modern biology.
Kalderimis A,Lyne R,Butano D,Contrino S,Lyne M,Heimbach J,Hu F,Smith R,Stepan R,Sullivan J,Micklem G
Nucleic Acids Res 2014
View Paper (PubMed)
View Publication
Related Standards
Reporting Guidelines
No guidelines defined
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
Implementing Policies
This record is not implemented by any policy.
