How to cite this record
FAIRsharing.org: Datanator; Datanator; DOI: https://doi.org/10.25504/FAIRsharing.NmIgg9;
Last edited: Sept. 24, 2020, 9:20 a.m.; Last accessed: Mar 01 2021 4:23 p.m.
Publication for citation
Datanator: an integrated database of molecular data for quantitatively modeling cellular behavior
Yosef D. Roth, Zhouyang Lian, Saahith Pochiraju, Bilal Shaikh & Jonathan R. Karr; bioRxiv ;
2020.
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'The FAIRsharing Team' at 09:16, 24 Sep 2020 (approved):
'licences' has been modified:
Before:
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)|https://github.com/KarrLab/datanator/blob/master/DATA_LICENSE|Data
MIT Licence|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
After:
MIT Licence|https://opensource.org/licenses/mit|Software
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)|https://creativecommons.org/licenses/by-nc/4.0/|Data
Added:
MIT Licence|https://opensource.org/licenses/mit|Software
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)|https://creativecommons.org/licenses/by-nc/4.0/|Data
Removed:
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)|https://github.com/KarrLab/datanator/blob/master/DATA_LICENSE|Data
MIT Licence|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
'onto_disciplines' has been modified:
Before:
Data Integration
Metabolomics
Molecular biology
Omics
Systems Biology
After:
Biochemistry
Data Integration
Genomics
Metabolomics
Molecular biology
Omics
Systems Biology
Added:
Biochemistry
Genomics
Removed:
'onto_domains' has been modified:
Before:
Concentration
RNA modification
Reaction data
modeling and simulation objective
After:
Concentration
RNA modification
Reaction data
genome
modeling and simulation objective
Added:
genome
Removed:
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'jonrkarr' at 20:56, 23 Sep 2020 (approved):
'licences' has been modified:
Before:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
MIT Licence|https://opensource.org/licenses/mit|Data
After:
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)|https://github.com/KarrLab/datanator/blob/master/DATA_LICENSE|Data
MIT Licence|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
Added:
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)|https://github.com/KarrLab/datanator/blob/master/DATA_LICENSE|Data
MIT Licence|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
Removed:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
MIT Licence|https://opensource.org/licenses/mit|Data
'related_databases' has been modified:
Before:
MODOMICS
BRENDA
SABIO-RK Biochemical Reaction Kinetics Database
After:
MODOMICS
SABIO-RK Biochemical Reaction Kinetics Database
Added:
Removed:
BRENDA
'supportLinks' has been modified:
Before:
email|info@karrlab.org
help|https://www.datanator.info/help
online documentation|https://api.datanator.info
online documentation|https://datanator.info/about
online documentation|https://datanator.info/stats
After:
FAQ|https://www.datanator.info/help
email|info@karrlab.org
forum|https://github.com/KarrLab/datanator_frontend/issues
help|https://www.datanator.info/help
online documentation|https://datanator.info/about
online documentation|https://api.datanator.info
online documentation|https://datanator.info/stats
Added:
FAQ|https://www.datanator.info/help
forum|https://github.com/KarrLab/datanator_frontend/issues
Removed:
'publications' has been modified:
Before:
After:
Datanator: an integrated database of molecular data for quantitatively modeling cellular behavior|Yosef D. Roth, Zhouyang Lian, Saahith Pochiraju, Bilal Shaikh & Jonathan R. Karr|bioRxiv|2020
Added:
Datanator: an integrated database of molecular data for quantitatively modeling cellular behavior|Yosef D. Roth, Zhouyang Lian, Saahith Pochiraju, Bilal Shaikh & Jonathan R. Karr|bioRxiv|2020
Removed:
'dataProcesses' has been modified:
Before:
Web interface, data access, https://www.datanator.info
Data download, data access, https://open.quiltdata.com/b/karrlab/packages/karrlab/datanator/
Description of curation process, data curation, https://www.datanator.info/about
After:
Web interface, data access, https://www.datanator.info
Data download, data access, https://doi.org/10.5281/zenodo.3971047
Description of curation process, data curation, https://www.datanator.info/about
Added:
Data download, data access, https://doi.org/10.5281/zenodo.3971047
Removed:
Data download, data access, https://open.quiltdata.com/b/karrlab/packages/karrlab/datanator/
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'The FAIRsharing Team' at 13:39, 15 Jun 2020 (approved):
'licences' has been modified:
Before:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
After:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
MIT Licence|https://opensource.org/licenses/mit|Data
Added:
MIT Licence|https://opensource.org/licenses/mit|Data
Removed:
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'The FAIRsharing Team' at 13:37, 15 Jun 2020 (approved):
'licences' has been modified:
Before:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://open.quiltdata.com/b/karrlab/packages/karrlab/datanator/tree/latest/LICENSE|Data
MIT|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
After:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
Added:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
Removed:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://open.quiltdata.com/b/karrlab/packages/karrlab/datanator/tree/latest/LICENSE|Data
MIT|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'The FAIRsharing Team' at 16:04, 09 Jun 2020 (approved):
'taxonomies' has been modified:
Before:
Not applicable
After:
All
Added:
All
Removed:
Not applicable
'supportLinks' has been modified:
Before:
email|info@karrlab.org
help|https://www.datanator.info/help
online documentation|https://api.datanator.info
After:
email|info@karrlab.org
help|https://www.datanator.info/help
online documentation|https://api.datanator.info
online documentation|https://datanator.info/about
online documentation|https://datanator.info/stats
Added:
online documentation|https://datanator.info/about
online documentation|https://datanator.info/stats
Removed:
'onto_domains' has been modified:
Before:
modeling and simulation objective
After:
Concentration
RNA modification
Reaction data
modeling and simulation objective
Added:
Concentration
RNA modification
Reaction data
Removed: