Did we miss something? Our
COVID-19 Collection is growing, but not yet complete. Tell us what's missing. Email
contact@fairsharing.org or add missing resources to our
spreadsheet
Datanator
General Information
Datanator is an integrated database of genomic and biochemical data designed to help investigators find data about specific molecules and reactions in specific organisms and specific environments for meta-analyses and mechanistic models. Datanator currently includes metabolite concentrations, RNA modifications and half-lives, protein abundances and modifications, and reaction kinetics integrated from several databases and numerous publications. The Datanator website and REST API provide tools for extracting clouds of data about specific molecules and reactions in specific organisms and specific environments, as well as data about similar molecules and reactions in taxonomically similar organisms.
How to cite this record
FAIRsharing.org: Datanator; Datanator; DOI: https://doi.org/10.25504/FAIRsharing.NmIgg9;
Last edited: July 31, 2020, 2:04 p.m.; Last accessed: Sep 20 2020 4:59 a.m.
Record added: May 22, 2020, 2:02 a.m.
Record updated:
June 15, 2020, 1:39 p.m. by The FAIRsharing Team.
Show edit history
Hide edit history
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'The FAIRsharing Team' at 13:39, 15 Jun 2020 (approved):
'licences' has been modified:
Before:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
After:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
MIT Licence|https://opensource.org/licenses/mit|Data
Added:
MIT Licence|https://opensource.org/licenses/mit|Data
Removed:
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'The FAIRsharing Team' at 13:37, 15 Jun 2020 (approved):
'licences' has been modified:
Before:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://open.quiltdata.com/b/karrlab/packages/karrlab/datanator/tree/latest/LICENSE|Data
MIT|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
After:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
Added:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://creativecommons.org/licenses/by-nc-nd/4.0/|Data
The MIT License (MIT)|https://opensource.org/licenses/mit|Data
Removed:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)|https://open.quiltdata.com/b/karrlab/packages/karrlab/datanator/tree/latest/LICENSE|Data
MIT|https://github.com/KarrLab/datanator/blob/master/LICENSE|Software
Edits to 'https://fairsharing.org/FAIRsharing.NmIgg9' by 'The FAIRsharing Team' at 16:04, 09 Jun 2020 (approved):
'taxonomies' has been modified:
Before:
Not applicable
After:
All
Added:
All
Removed:
Not applicable
'supportLinks' has been modified:
Before:
email|info@karrlab.org
help|https://www.datanator.info/help
online documentation|https://api.datanator.info
After:
email|info@karrlab.org
help|https://www.datanator.info/help
online documentation|https://api.datanator.info
online documentation|https://datanator.info/about
online documentation|https://datanator.info/stats
Added:
online documentation|https://datanator.info/about
online documentation|https://datanator.info/stats
Removed:
'onto_domains' has been modified:
Before:
modeling and simulation objective
After:
Concentration
RNA modification
Reaction data
modeling and simulation objective
Added:
Concentration
RNA modification
Reaction data
Removed:
Access / Retrieve Data
Conditions of Use
Data Curation
Data Access
REST Web Services
Publications
No publications available
Related Standards
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
Implementing Policies
This record is not implemented by any policy.
Credit
Funds
Maintains
Grant Number(s)
P41EB023912
(National Institute of Biomedical Imaging and Bioengineering (NIBIB), USA)
R35GM119771
(National Institute of General Medical Sciences (NIGMS), Bethesda, MD, USA)
We need your help!
Do you have 5-10 minutes to help FAIRsharing prioritize future enhancements?
Then please fill out this short questionnaire to
prioritise the improvements that are of greatest importance to you.
Your views will help us choose which enhancements to provide first. Thank you very much!
