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ready Eukaryotic Ribosomal Internal Transcribed Spacer 1 Database

Abbreviation:ITSoneDB

General Information
The Eukaryotic Ribosomal Internal Transcribed Spacer 1 Database (ITSoneDB) is a collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences. It is intended to provide a curated reference database aimed at ITS1-based metagenomic surveys. Each ITS1 is mapped on the NCBI reference taxonomy with its start and end positions precisely annotated. ITSoneDB has been developed in agreement to the FAIR guidelines by enabling the users to query and download its content through a simple web-interface and access relevant metadata by cross-linking to European Nucleotide Archive.

Homepage http://itsonedb.cloud.ba.infn.it/index.jsp

Countries that developed this resource Italy

Created in 2017

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Awaiting DOI assignment.

Publication for citation  ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences. Santamaria M,Fosso B,Licciulli F,Balech B,Larini I,Grillo G,De Caro G,Liuni S,Pesole G; Nucleic Acids Res ; 2017; 10.1093/nar/gkx855;


Record added: March 11, 2021, 12:18 p.m.
Record updated: March 11, 2021, 12:18 p.m. by The FAIRsharing Team.

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Additional Information

Contact Graziano Pesole   ORCID

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Data Release

Download and Export Data http://itsonedb.cloud.ba.infn.it/index.jsp

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Simple, Advanced and Tree Search http://itsonedb.cloud.ba.infn.it/index.jsp



Publications

ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences.

Santamaria M,Fosso B,Licciulli F,Balech B,Larini I,Grillo G,De Caro G,Liuni S,Pesole G
Nucleic Acids Res 2017

View Paper (PubMed) View Publication

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