Nuclear Magnetic Resonance Controlled Vocabulary
How to cite this record FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Sep 20 2019 6:37 a.m.
Record updated: Jan. 24, 2018, 1:03 p.m. by DanielSchober.
Edits to 'https://fairsharing.org/FAIRsharing.xm7tkj' by 'DanielSchober' at 13:03, 24 Jan 2018 (approved): 'miriam_url' has been modified: Before: None After:
Edits to 'https://fairsharing.org/FAIRsharing.xm7tkj' by 'DanielSchober' at 12:55, 24 Jan 2018 (approved): 'description' has been modified: Before: nmrCV is a MSI-sanctioned NMR controlled vocabulary, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with standardized meaningful data descriptors. This CV is the successor of the (now deprecated) 'NMR-instrument specific component of metabolomics investigations' CV of 2006. This standard is currently financed via the PhenoMeNal EU project. After: nmrCV is a MSI-sanctioned NMR controlled vocabulary, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with standardized meaningful data descriptors. This CV is the successor of the (now deprecated) 'NMR-instrument specific component of metabolomics investigations' CV of 2006. This standard is currently financed via the PhenoMeNal EU project. It is a simple taxonomy build according to the same design principles as its role model artefact, the Mass Spec CV of PSI.
Edits to 'https://fairsharing.org/FAIRsharing.xm7tkj' by 'DanielSchober' at 12:50, 30 Mar 2017 (approved): 'homepage' has been modified: Before: http://purl.bioontology.org/ontology/NMR After: http://www.nmrML.org
|schema file||https://github.com/nmrML/nmrML/tree/mast ...|
|Contact||Daniel Schober ORCID|
|Parsers and visualisers||http://nmrml.org/tools/|
No XSD schemas defined
Conditions of UseApplies to: Data use
The metabolomics standards initiative.
MSI Board Members, Sansone SA, Fan T, Goodacre R, Griffin JL, Hardy NW, Kaddurah-Daouk R, Kristal BS, Lindon J, Mendes P, Morrison N, Nikolau B, Robertson D, Sumner LW, Taylor C, van der Werf M, van Ommen B, Fiehn O.
Nat. Biotechnol. 2007
nmrML: A Community Supported Open Data Standard for the Description, Storage, and Exchange of NMR Data.
Schober D1, Jacob D2, Wilson M3, Cruz JA3, Marcu A3, Grant JR3, Moing A2, Deborde C2, de Figueiredo LF4, Haug K4, Rocca-Serra P5, Easton J6, Ebbels TMD7, Hao J7, Ludwig C8, Günther UL9, Rosato A10, Klein MS11, Lewis IA11, Luchinat C10, Jones AR12, Grauslys A12, Larralde M13, Yokochi M14, Kobayashi N14, Porzel A15, Griffin JL16, Viant MR17, Wishart DS3, Steinbeck C4, Salek RM4, Neumann S1
Anal. Chem. 2017
View in BioPortal.
No semantic standards defined
Models and Formats
No identifier schema standards defined
No metrics standards defined
MetaboLights is a database is a collection of metabolite structures. This resource provides information on the compound origins,the biological roles, locations and concentrations, as well as experimental data from metabolic experiments. The tools and capabilities of this database is firmly routed in collaborative working worldwie with the metabolomics community such as the Metabolomics Society and the associated Metabolomics Standards Initiative (MSI).
The Human Metabolome Database
The Human Metabolome Database (HMDB) is a database containing detailed information about small molecule metabolites found in the human body.It contains or links 1) chemical 2) clinical and 3) molecular biology/biochemistry data.
Biological Magnetic Resonance Databank
BMRB collects, annotates, archives, and disseminates (worldwide in the public domain) the important spectral and quantitative data derived from NMR spectroscopic investigations of biological macromolecules and metabolites. The goal is to empower scientists in their analysis of the structure, dynamics, and chemistry of biological systems and to support further development of the field of biomolecular NMR spectroscopy.
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.
This record is not implemented by any policy.