standards > reporting guideline > DOI:10.25504/FAIRsharing.32b10v


ready Minimum Information About a Microarray Experiment

Abbreviation: MIAME


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General Information
MIAME is intended to specify all the information necessary for an unambiguous interpretation of a microarray experiment, and potentially to reproduce it. MIAME defines the content but not the format for this information.



How to cite this record FAIRsharing.org: MIAME; Minimum Information About a Microarray Experiment; DOI: https://doi.org/10.25504/FAIRsharing.32b10v; Last edited: Feb. 7, 2021, 7:56 p.m.; Last accessed: May 06 2021 11:49 a.m.


Record updated: Feb. 6, 2021, 10:12 a.m. by The FAIRsharing Team.

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Publications

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.

Brazma A,Hingamp P,Quackenbush J,Sherlock G,Spellman P,Stoeckert C,Aach J,Ansorge W,Ball CA,Causton HC,Gaasterland T,Glenisson P,Holstege FC,Kim IF,Markowitz V,Matese JC,Parkinson H,Robinson A,Sarkans U,Schulze-Kremer S,Stewart J,Taylor R,Vilo J,Vingron M
Nat Genet 2001

View Paper (PubMed) View Publication

Minimum Information About a Microarray Experiment (MIAME)--successes, failures, challenges.

Brazma A
ScientificWorldJournal 2009

View Paper (PubMed) View Publication


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This database enables the reliable identification of an individual Interferon Regulated Gene (IRG) or IRG signatures from high-throughput data sets (i.e. microarray, proteomic data etc.). It also assists in identifying regulatory elements, chromosomal location and tissue expression of IRGs in human and mouse. This upgraded version, Interferome v2.0 has quantitative data, more detailed annotation and search capabilities and can be queried for one to a thousand genes, such as from from a microarray experiment.

Longhorn Array Database
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Genomic Expression Archive
Genomic Expression Archive (GEA) is a public database of functional genomics data such as gene expression, epigenetics and genotyping SNP array. Both microarray- and sequence-based data are accepted in the MAGE-TAB format in compliance with MIAME and MINSEQE guidelines, respectively. GEA issues accession numbers, E-GEAD-n to experiment and A-GEAD-n to array design.

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