BLAST-like Alignment Tool Format
Abbreviation: BLAT Format
Developed in United States
Created in 2001
Knowledge Domains BETA
How to cite this record FAIRsharing.org: BLAT Format; BLAST-like Alignment Tool Format; DOI: https://doi.org/10.25504/FAIRsharing.chmyvk; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: Jan 19 2019 9:06 a.m.
Record updated: Oct. 22, 2016, 7:07 p.m. by The FAIRsharing Team.
Edits to 'https://fairsharing.org/FAIRsharing.chmyvk' by 'The FAIRsharing Team' at 19:07, 22 Oct 2016 (approved): 'homepage' has been modified: Before: http://genome.ucsc.edu/FAQ/FAQformat.html#format2 After: http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#BLATAlign
|online documentation||http://genome.ucsc.edu/FAQ/FAQblat.html# ...|
|Contact||W James Kent|
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Conditions of UseApplies to: Data use
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No semantic standards defined
Models and Formats
No syntax standards defined
No identifier schema standards defined
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Genome assemblies and aligned annotations for a wide range of vertebrates and model organisms, along with an integrated tool set for visualizing, comparing, analyzing and sharing both publicly available and user-generated genomic datasets.
The UCSC Archaeal Genome Browser
The UCSC Archaeal Genome Browser is a window on the biology of more than 100 microbial species from the domain Archaea. Basic gene annotation is derived from NCBI Genbank/RefSeq entries, with overlays of sequence conservation across multiple species, nucleotide and protein motifs, non-coding RNA predictions, operon predictions, and other types of bioinformatic analyses. In addition, we display available gene expression data (microarray or high-throughput RNA sequencing). Direct contributions or notices of publication of functional genomic data or bioinformatic analyses from archaeal research labs are very welcome.
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