Distributed Sequence Annotation System
Abbreviation: DAS
Homepage http://www.biodas.org/documents/spec-1.6.html
Countries that developed this resource United States
Created in 2000
Taxonomic range
Knowledge Domains
Subjects
How to cite this record FAIRsharing.org: DAS; Distributed Sequence Annotation System; DOI: https://doi.org/10.25504/FAIRsharing.mcgj5b; Last edited: Jan. 8, 2019, 1:28 p.m.; Last accessed: Apr 22 2021 11:31 p.m.
Record updated: Oct. 24, 2016, 7:05 p.m. by The FAIRsharing Team.
FAQ | http://biodas.open-bio.org/wiki/DasFAQ |
Mailing List | None |
online documentation | http://biodas.open-bio.org/wiki/Main_Pag ... |
Additional Information
Contact | Contact |
No XSD schemas defined
Conditions of Use
The distributed annotation system.
Dowell RD,Jokerst RM,Day A,Eddy SR,Stein L
BMC Bioinformatics 2001
Reporting Guidelines
No guidelines defined
Terminology Artifacts
No semantic standards defined
Models and Formats
No syntax standards defined
Identifier Schemas
No identifier schema standards defined
Metrics
No metrics standards defined
Gene3D uses the information in CATH to predict the locations of structural domains on millions of protein sequences available in public databases. Sequence data from UniProtKB and Ensembl for domains with no experimentally determined structures are scanned against CATH HMMs to predict domain sequence boundaries and make homologous superfamily assignments.
SNPedia
SNPedia is a wiki resource of the functional consequences of human genetic variation as published in peer-reviewed studies. Entries are formatted to allow associations to be assigned to single genotypes as well as sets of genotypes (genosets). Curation occurs through editorial, community/user, and semi-automated processes.
The MOuse NOnCode Lung database
MONOCLdb is an integrative and interactive database designed to retrieve and visualize annotations and expression profiles of long-non coding RNAs (lncRNAs) expressed in Collaborative Cross (http://compgen.unc.edu/) founder mice in response to respiratory influenza and SARS infections.
openSNP
A crowdsourced collection of personal genomics data. Includes SNP genotyping, exome sequencing data, phenotypic annotation and quantified self tracking data.
This record is not implemented by any policy.
Record Maintainer
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Maintains
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA (Research institute)