Fission Yeast Phenotype Ontology
Countries that developed this resource United Kingdom
Created in 2012
How to cite this record FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: May 29 2020 12:53 p.m.
Record updated: July 8, 2019, 11:18 a.m. by The FAIRsharing Team.
Edits to 'https://fairsharing.org/FAIRsharing.4vr0ys' by 'The FAIRsharing Team' at 11:18, 08 Jul 2019 (approved): 'organizations' has been modified: Before: Pombase|http://www.pombase.org/|Maintains The Wellcome Trust Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK|http://www.sanger.ac.uk|Maintains After: Pombase|http://www.pombase.org/|Maintains The Wellcome Trust Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK|http://www.sanger.ac.uk|Maintains The Wellcome Trust, UK|https://wellcome.ac.uk/|Funds Added: The Wellcome Trust, UK|https://wellcome.ac.uk/|Funds Removed: 'supportLinks' has been modified: Before: online documentation|http://www.pombase.org/browse-curation/fission-yeast-phenotype-ontology online documentation|https://curation.pombase.org/pombase-trac/wiki/FissionYeastPhenotypeOntology After: firstname.lastname@example.org online documentation|http://www.pombase.org/browse-curation/fission-yeast-phenotype-ontology online documentation|https://curation.pombase.org/pombase-trac/wiki/FissionYeastPhenotypeOntology Added: email@example.com Removed: 'contactORCID' has been modified: Before: After: 0000-0003-4148-4606 'onto_disciplines' has been modified: Before: Genetics Life Sciences Phylogenetics After: Genetics Life Sciences Ontology and Terminology Phylogenetics Added: Ontology and Terminology Removed: 'contact' has been modified: Before: General Enquiries After: Midori Harris 'contactEmail' has been modified: Before: firstname.lastname@example.org After: email@example.com 'grants' has been modified: Before: After: WT090548MA Added: WT090548MA Removed:
Edits to 'https://fairsharing.org/FAIRsharing.4vr0ys' by 'The FAIRsharing Team' at 10:53, 08 Jul 2019 (approved): 'miriam_id' has been modified: Before: None After:
Edits to 'https://fairsharing.org/FAIRsharing.4vr0ys' by 'The FAIRsharing Team' at 19:54, 24 Oct 2016 (approved): 'contactName' has been modified: Before: After: General Enquiries Domain list has changed: Previous values: Life Science|domain| Phenotype|information content entity|http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Investigation.owl#birnlex_2087 New values: Phenotype|information content entity|http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Investigation.owl#birnlex_2087 Life Science|domain| Gene Ontology annotation|x| Genetics|process|http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Scientific-Discipline.owl#nlx_inv_100628 Phylogenetics|property| Organisations have changed: Previous values: Pombase New values: Pombase The Wellcome Trust Sanger Institute Added: Removed:
|support email||General Enquiries|
|online documentation||http://www.pombase.org/browse-curation/f ...|
|online documentation||https://curation.pombase.org/pombase-tra ...|
|Contact||Midori Harris ORCID|
No XSD schemas defined
Conditions of UseApplies to: Data use
No guidelines defined
Models and Formats
No syntax standards defined
No identifier schema standards defined
No metrics standards defined
PomBase is a model organism database that provides organization of and access to scientific data for the fission yeast Schizosaccharomyces pombe. PomBase supports genomic sequence and features, genome-wide datasets and manual literature curation as well as providing structural and functional annotation and access to large-scale data sets.
SYSGRO: A resource of fission yeast phenotypic data & analysis
SYSGRO is a high throughput/high-content microscopy fission yeast phenotype database from the Carazo Salas Lab in the University of Cambridge UK, funded thanks to a EU ERC Starting Grant. It contains cell shape, microtubule & cell cycle progression computational phenotypes for 3004 non-essential gene knockout cell lines. It is the first multi-phenotypic microscopy profiling functional genomics resource for any organism/
The Open Biological and Biomedical Ontology (OBO) Foundry is a collective of ontology developers that are committed to collaboration and adherence to shared principles. The mission of the OBO Foundry is to develop a family of interoperable ontologies that are both logically well-formed and scientifically accurate. To achieve this, OBO Foundry participants voluntarily adhere to and contribute to the development of an evolving set of principles including open use, collaborative development, non-overlapping and strictly-scoped content, and common syntax and relations, based on ontology models that work well, such as the Gene Ontology (GO). The OBO Foundry is overseen by an Operations Committee with Editorial, Technical and Outreach working groups.
Cyclebase is a database to visualize and download results from genome-wide cell-cycle-related experiments. In addition to genome annotation, Cyclebase also provides mRNA data, protein expression data, and integrated cell-cycle phenotype information from high-content screens and model organism databases.
This record is not implemented by any policy.
This record is maintained by PomBase
The Wellcome Trust, UK (Charitable foundation)
WT090548MA (The Wellcome Trust, UK)