Standards > reporting guideline > DOI:10.25504/FAIRsharing.9aa0zp


ready Minimum Information about any (x) Sequence

Abbreviation:MIxS


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General Information
The minimum information about any (x) sequence (MIxS) is an overarching framework of sequence metadata, that includes technology-specific checklists from the previous MIGS and MIMS standards, provides a way of introducing additional checklists such as MIMARKS, and also allows annotation of sample data using environmental packages.

How to cite this record: FAIRsharing.org: MIxS; Minimum Information about any (x) Sequence; DOI: https://doi.org/10.25504/FAIRsharing.9aa0zp; Last edited: Feb. 22, 2018, 2:08 p.m.; Last accessed: Apr 20 2018 7:44 a.m.



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This record is maintained by Genomic Standards Consortium  (pyilmaz)

Record updated: April 27, 2017, 1:29 p.m. by pyilmaz.




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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

Yilmaz P, Kottmann R, Field D, Knight R, Cole JR et al.
Nature Biotechnology 2011

View Paper (PubMed) View Paper (DOI)


Implementing Databases (3)
European Nucleotide Archive
The European Nucleotide Archive (ENA) is a globally comprehensive data resource for nucleotide sequence, spanning raw data, alignments and assemblies, functional and taxonomic annotation and rich contextual data relating to sequenced samples and experimental design. Serving both as the database of record for the output of the world's sequencing activity and as a platform for the management, sharing and publication of sequence data, the ENA provides a portfolio of services for submission, data management, search and retrieval across web and programmatic interfaces. The ENA is part of the International Nucleotide Sequence Database Collaboration.

The European Genome-phenome Archive
The European Genome-phenome Archive (EGA) allows you to explore datasets from genomic studies, provided by a range of data providers. Access to datasets must be approved by the specified Data Access Committee (DAC).

PeanutBase
Large-scale genomic data for peanut have only become available in the last few years, with the advent of low-cost sequencing technologies. To make the data accessible to researchers and to integrate across diverse types of data, the International Peanut Genomics Consortium funded the development of PeanutBase. This database provides access to genetic maps and markers, locations of quantitative trait loci (QTLs), genome sequences, gene locations and sequences, gene families and correspondences with genes in other species, and descriptions of traits and growth characteristics. It also provides tools for exploration and analysis, including sequence of genomic and genic sequences, and keyword searches of genes, gene families, and QTL studies. These resources should facilitate breeding advancements in peanut, helping improve crop productivity and there are a variety of resources for peanut research around the web, ranging from tools for basic plant biology to information for growers and various sectors of the peanut industry to resources for plant breeders.


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